Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01304 ATGCTCGCGTGGACCGTGTCTGAAACTCATAACCGTGTTAATCTGACGTTATCGGAGCTTAGCGGCGTTCTCTGGTCACCGGAGATCTCTTTTTCGAACCACTTCACTATGTCGATAAAAACTGTCAAAGTCAGTAATGTTTCCCTGGGAGCAACTGAGCGGGACCTTACagagttcttttctttttctggtgATATTGAATATGTTGAAATGCAGAGTCATGACGAGCGGTCACAGACTGCGTATGTCACCTTCAAGGATTCACAGGGAGCTGAGACTGCAGTACTACTATCGGGAGCAACAATTGTTGATCTATCAGTTACAATAAATCTGGATCCGGATTACAAGCTTCCACCTGCTGTCCTTGCATCAGCTGCAAATGAAAGCAAAAGTCCGGGCGGTGCTGAATCTGCTTTGCAAAAGGCGGAGGATGTTGTCAGTAGCATGCTGGCCAAGGGCTTTGTCTTAGGGAAAGATGCTGTCAACAAAGCAAAGTCTTTCGATGAGAAGCACCAGTTAACTTCAACAGCCTCAGCAAAAGTTTCAACCTTTGACCAGAAAATTGGGTTCACTGAGAAAATAAGTGCGGGTGCTTCAGTTGTGAGTGATAGAGTCCGGGAAGTGGATCAAAAATTTCAGGTTTCTGAGAAAACCAAATCAGCATTTGCAGCTGCTGAACAGAAGGTCAGCAGTGCTGGTTCTGCTATCATGAAGAATCGCTATATTCTCACTGGGACTACATGGGTAGCGGGTGCTTTCAATAAGGTTTCCAAGGCAGCAGGGGAAGTAGGACAGAAGACGAAAGAGAAAGTAGAGAATGctgaagaggaagagaagcGTAAAGTAGAGGATCAGTATGCACAGGTTCTATCTGAGTCCCCAAAAGCCAGTGCAACAAGTGAACAGCATCCTTCCAAGCCTAAGCCTGCTCCTGCTCCTGCTCAGGGTTTAATCCTTTG 959 0.4432 MLAWTVSETHNRVNLTLSELSGVLWSPEISFSNHFTMSIKTVKVSNVSLGATERDLTEFFSFSGDIEYVEMQSHDERSQTAYVTFKDSQGAETAVLLSGATIVDLSVTINLDPDYKLPPAVLASAANESKSPGGAESALQKAEDVVSSMLAKGFVLGKDAVNKAKSFDEKHQLTSTASAKVSTFDQKIGFTEKISAGASVVSDRVREVDQKFQVSEKTKSAFAAAEQKVSSAGSAIMKNRYILTGTTWVAGAFNKVSKAAGEVGQKTKEKVENAEEEEKRKVEDQYAQVLSESPKASATSEQHPSKPKPAPAPAQGLIL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01304 319 PANTHER BINDING PARTNER OF ACD11 1 37 301 - -
Bva11g01304 319 MobiDBLite consensus disorder prediction 290 304 - -
Bva11g01304 319 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 102 IPR000504 GO:0003723
Bva11g01304 319 Coils Coil 268 292 - -
Bva11g01304 319 SMART rrm1_1 41 110 IPR000504 GO:0003723
Bva11g01304 319 Gene3D - 37 110 IPR012677 -
Bva11g01304 319 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 37 301 - -
Bva11g01304 319 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 114 IPR000504 GO:0003723
Bva11g01304 319 MobiDBLite consensus disorder prediction 267 319 - -
Bva11g01304 319 SUPERFAMILY RNA-binding domain, RBD 28 113 IPR035979 GO:0003676
Bva11g01304 319 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01304 Bva-Chr11 13384598 13389231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01304 - - gmx:100809613 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01304 11 13384598 13389231 Bva11g01304 11 13384598 13389231 ECH