Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01299 ATGGAAGAAGAAGCTCCTGATCTGCTGTGCCAGCTCGAAAACGTCCAAGGCTTAGTCGACGCCCTCAGTGCCGTTCGCTGGAAACGCCATCAGGACGCTGTGGTGGAGTTGTCAGAACACGGCATTGTCTTGATTGTGGAAGAAAGTGGTTGTCTTCAGGCCAAGGTTTATCTAAAGCGCGAGTTATTTGTTCGTTATGAATATAATGCACAAGGACGGCCTCGTTTTGGAGTGAGCTTGGGACTTTTTATAGATTGCTTGAACACATACTCAGTTCCTGGTCAGTCAAGTTCgattcaaattcaatatcCAGGACCTGACATGCAGGTTCTTCTGAAATCTCTTGATTCACAGGATGCCAGTATTTGTGCACAGCTCAGGACAAGGATTCCTGAGACATTTGCATGGGACTACAATTTTGAACCTGCTGGAACAAACCCACTGACTTTTACAGTTAAGTCTGCAGCTTTGAGGGAAGCTATTGAGGATCTTGAATGGCCGGGATCAAGCATTCAGATTATTCTACAACCAGATCCCCCTTCTGTTATTTTAAGAGGTGAAGGTCACGGAGATTTGCAGATAGACTTGTTATATCATGCGCATACAGATCTCTTGGCGGCATTTCAGTGTGATCATCGGGTTTCTTTCAAATACAAATATAAGTTCCTCAGAGCAACGACTTCTAATATACCTGGCAGcgttattaaagaaaatagaggaagCAAGGTAACCATTGGGAGAGGTGGAATGTTGAAAGTTCAGCATCTAATTCCAATTTCGAAGATGTCTGTTTCGCACCCGTATGTAGATTCTGTAGGCTATCAGCAGCCAGGTCGAATAGCTTATATCGAATTCTTTGTGAAACCAGAGCTAAGTGAAGACTCTACAAATGATTATTA 899 0.4205 MEEEAPDLLCQLENVQGLVDALSAVRWKRHQDAVVELSEHGIVLIVEESGCLQAKVYLKRELFVRYEYNAQGRPRFGVSLGLFIDCLNTYSVPGQSSSIQIQYPGPDMQVLLKSLDSQDASICAQLRTRIPETFAWDYNFEPAGTNPLTFTVKSAALREAIEDLEWPGSSIQIILQPDPPSVILRGEGHGDLQIDLLYHAHTDLLAAFQCDHRVSFKYKYKFLRATTSNIPGSVIKENRGSKVTIGRGGMLKVQHLIPISKMSVSHPYVDSVGYQQPGRIAYIEFFVKPELSEDSTNDY 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01299 299 Pfam Repair protein Rad1/Rec1/Rad17 11 229 IPR003021 GO:0000077
Bva11g01299 299 CDD PCNA 9 258 - -
Bva11g01299 299 Gene3D - 5 290 - -
Bva11g01299 299 SUPERFAMILY DNA clamp 148 257 - -
Bva11g01299 299 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD1 2 293 IPR003021 GO:0000077
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01299 Bva-Chr11 13366755 13369444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01299 K02830 - jre:109020226 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01299 11 13366755 13369444 Bva11g01299 11 13366755 13369444 ECH