Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01220 ATGAAGGCGGAGCACCAGAATCTGTATCAGCCTCACAAAGGAGGAACACTTTGCAAAATGCTTTTCCCAGTACTCTTGCTCACTTTGTTCTTTCCGTTGGGCCATGCCCAGTCTTCAATGTCACCGGAATTTAGCATTATAAAACCTAGGCACTCACGACTTCTCAAGAGTGCTTTACAACGTGAAACTTCAGCATTTCTGCTTTCTGATCCGTGGGCTCCTTTAGAAAACCAAGGCTGGAGATCCTGTGTTGAATCTAGAAATGGTCCAGCACTACCAGAAAAGTCTGAGGGATACATCCAAGTATTTCTTGACGGAGGATTGAACCAGCAGAGAATGGGGatatGTGATGCTGTTGCTGTTGCAAAAATACTGAATGCAACTCTTGTAATCCCATACCTTGAAGTGAATCCGGTTTGGAAAGATTCAAGCTCCTTTGAGGATATATATGATGTGGATCACTTCATTGATGTATTGAAGGATGATGTTTCTATAGTTAAAGAACTGCCAGAGGAGTACTCTTGGAGCACAAGGGAGTATTATGCCACTGCTATCCGGGACAACAGAATCAAAGTTGCACCTGTTCATGCATCAGCAAACTGGTATCTGGAAAATGTGTTGCCAGTCCTACGGAGTTATGGTGTCGCTGCAATCTCTCCATTTTCTCATCGTCTGAGTTTTGACAACTTGCCAATGGATATCCAACGTCTACGTTGTAAAGTCAACTTTCAAGCGCTCACTTTTGTTCCTCACATCAGAACACTTGGAGATGCTCTTATCAGCCGCCTTCGCTATCCTCAAGACCCGCTAAAGGTCACTGCTGCCGGTGATAAGGAAATGGCAGGGAAGTTTGTTGTACTACACCTTCGGTTTGATAAGGATATGGCAGCCCATTCAGCTTGTGACTTTGGTGGGGGCAAAGCTGAAAAGTTGGCTCTTGCCAAGTATCGGCAGGTGATTTGGCAGGGAAGGGTTCTTAATTCGCAATTCACCGATGAAGAGTTGAGGAGCCTGGGCCGTTGCCCAATGACTCCAGAAGAGGTTGGATTACTTCTAGCAGCTTTGGGATTTGACAACAGCACTCGTTTGTATCTGGCTTCTCACAAGGTATATGGAGGGGAGGCAAGGATTTCAACTTTGAGAGAATTATTTCCACTGATGGAAGATAAAAAGAACCTTGCTTCATCTGAGGAACGTTCCCAGATCAAGGGAAAAGCTTCTCTATTAGCTGCAGTTGATTACTATGTTGGCATGCACAGTGACATCTTCATCTCTGCTTCCCCAGGAAACATGCATAACGCAATGGTTGGACACCGaacttatttgaatttgaagacCATAAAACCAAGCATGGCCTTAATGGGTCAGCTCTTCCTGAACAAAAACATAAGTTGGTCGGACTTCCAGCAATCGGTGGTTGAAGGTCACCAAAATAGGCAAGGTCAGATCAGATTGAGGAAGCCGAAACAGTCCATATACACATATCCTGCTCCTGATTGCATGTGCCAAGCTTA 1514 0.4439 MKAEHQNLYQPHKGGTLCKMLFPVLLLTLFFPLGHAQSSMSPEFSIIKPRHSRLLKSALQRETSAFLLSDPWAPLENQGWRSCVESRNGPALPEKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLEVNPVWKDSSSFEDIYDVDHFIDVLKDDVSIVKELPEEYSWSTREYYATAIRDNRIKVAPVHASANWYLENVLPVLRSYGVAAISPFSHRLSFDNLPMDIQRLRCKVNFQALTFVPHIRTLGDALISRLRYPQDPLKVTAAGDKEMAGKFVVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVIWQGRVLNSQFTDEELRSLGRCPMTPEEVGLLLAALGFDNSTRLYLASHKVYGGEARISTLRELFPLMEDKKNLASSEERSQIKGKASLLAAVDYYVGMHSDIFISASPGNMHNAMVGHRTYLNLKTIKPSMALMGQLFLNKNISWSDFQQSVVEGHQNRQGQIRLRKPKQSIYTYPAPDCMCQA 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01220 504 PANTHER O-FUCOSYLTRANSFERASE 39 16 503 - -
Bva11g01220 504 PIRSF UCP009360 3 504 IPR024709 -
Bva11g01220 504 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 16 503 - -
Bva11g01220 504 CDD O-FucT_plant 99 447 IPR024709 -
Bva11g01220 504 Pfam GDP-fucose protein O-fucosyltransferase 99 442 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01220 Bva-Chr11 12960463 12965135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01220 72 503 Miscellaneous Gene Families AT1G22460 34.071 1.74e-86 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01220 - - zju:107425164 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01220 11 12960463 12965135 Bva11g01220 11 12960463 12965135 ECH