Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01163 ATGGCCCGCAAGAAGATCAGAGAATATGATTCCAAGAGATTGTTGAAGGAGCATTTTAAGAGACTCTCTGGCAAGGAGTTGCCAATCAAGTCTGCACAAGTTACAGAATCCACCAATTTCACTGAGCTAGCAGAAAAGGAACCTTGGCTTCTATCTTCAAAATTGGTTGTGAAACCTGACATGTTATTTGGAAAGCGTGGCAAGAGTGGTTTGGTTGCATTAAATCTGGATTTGGCACAAGTTGCTTCTTTTGTGAAAGAGCGTCTCGGCAAAGAGGTTGAGATGGGTGGATGTAAAGGACCTATAACAACTTTCATTGTTGAACCTTTCATCCCGCACAATGAAGAGTTTTACCTTAACATTGTCTCAGAGAGACTAGGAGACAGTGTAAGCTTTTCACAATGCGGAggaattgaaattgaagaaaactgGGATAAGGTTAAAACTGTATTTGTTCCAACTGGAGTGCCTTTCACATCAGAAACTGTTGCCCCACTTGTTGCAACCCTTCCCTTGGAGATTAAAGGAGAAATTGAGGAGTTTCTCAAGGTGATATTCAGTCTATTTGAAGACCTGGATTTCACTTTCCTAGAGATGAATCCTTTCACATTGGTTAATGGAAAGCCTTATCCCTTGGATATGAGAGGCGAGTTAGACGACACTGCTGCATTCAAGAACTTCAAGAAatGGGGAGATATTGAATTTCCATTGCCATTTGGAAGGGTCATGAGTCCCACAGAGACTTTCATTCATGGATTGGATGAAAAGaCAAGTGCATCTTTGAAGTTCACAGTGTTGAACCCACATGGCAGAATTTGGACAATGGTAGCTGGAGGAGGTGCTAGTGTCATCTATGCTGATACGGTTGGAGATCTTGGCTATGCAGCCGAGCTTGGAAATTATGCAGAATATAGTGGAGCACCCAAGGAAGATGAAGTTTTGCAATATGCTAGAGTTGTAATTGATTGTGCAACTGCAAATCCTGATGGCCAAAAGAGAGCCCTTGTGATTGGAGGAGGAATAGCTAACTTCACTGATGTTGCTGCCACCTTCAGTGGCATAATTCGAGCATTGAAGGAGAAGGAAGCCAAGCTAAAAGCAGCAAATATGCACATATATGTGAGGAGAGGAGGTCCCAACTACCAGAAAGGTCTTGCAAAAATGCGAGCTCTTGGAGACGAGATTGGCATCCCCATTGAGGTTTATGGGCCAGAAGCAACCATGACTGGCATATGCAAAGAGGCAATTCAATACATCAATGCAGCTGCTTCTGTTTATGCGTA 1283 0.4224 MARKKIREYDSKRLLKEHFKRLSGKELPIKSAQVTESTNFTELAEKEPWLLSSKLVVKPDMLFGKRGKSGLVALNLDLAQVASFVKERLGKEVEMGGCKGPITTFIVEPFIPHNEEFYLNIVSERLGDSVSFSQCGGIEIEENWDKVKTVFVPTGVPFTSETVAPLVATLPLEIKGEIEEFLKVIFSLFEDLDFTFLEMNPFTLVNGKPYPLDMRGELDDTAAFKNFKKWGDIEFPLPFGRVMSPTETFIHGLDEKTSASLKFTVLNPHGRIWTMVAGGGASVIYADTVGDLGYAAELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGQKRALVIGGGIANFTDVAATFSGIIRALKEKEAKLKAANMHIYVRRGGPNYQKGLAKMRALGDEIGIPIEVYGPEATMTGICKEAIQYINAAASVYA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01163 427 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Bva11g01163 427 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Bva11g01163 427 SUPERFAMILY Succinyl-CoA synthetase domains 257 403 IPR016102 -
Bva11g01163 427 Gene3D - 1 233 - -
Bva11g01163 427 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 1-RELATED 1 423 - -
Bva11g01163 427 PANTHER ATP-CITRATE SYNTHASE 1 423 - -
Bva11g01163 427 Pfam ATP-grasp domain 6 203 IPR013650 -
Bva11g01163 427 Gene3D - 240 427 IPR016102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01163 Bva-Chr11 12640234 12643961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01163 1 423 Acyl Lipid Metabolism Gene Families AT1G10670 88.416 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01163 K01648 - gmx:100817228 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01163 11 12640234 12643961 Bva11g01163 11 12640234 12643961 ECH