Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01162 ATGAGGATCTTGGGTGGGAGGTGGATGGATGACCTGCAGATCGGAGACCTTCCTTCTTTAACACAGTCTGAGCTATCTCCTCCGCTCTGTCGCCGCTGTCGACGACCAGTCgGACCAATGGATGAATTTGAGCAATGGAAGGAACAAATACTTCACTGGTGGAGTCTGGGGTTGGAGTATCTTCGTCAGGTTCCCCCTACTCAGCTTTACGCTGCTGTTGCTGTTTTGGTCTTTACGATCTTGCTGCTTCAATCCATTCGGTTGTTCAAACGTGGAAAGTCTAATACCATTGTGTTGACGGGGCTTACTGGAGGCGGAAAAACTGTACTATTCTATCAACTTAGGGATGGATCTTACCATCAGGGTACTGTTACATCAATGGAACCTAATGAGGGCACTTTTGTTCTTCATTCTGAAACAACAAAGAAAGGCAAGATCAAACCTGTTCGTGTTGTTGATGTTCCTGGGCATTCTCGGCTTCGACCCAAACTGGATGAGTACTTGCCTCAAGCAGCTGGCATAGTTTTTGTGGTTGACGCTTTGGAATTCTTACCTAACTGCCGTGCTGCTTCAGAgTACCTGTATGATATTTTGACGAAGGGAAGTGTTGTGAGGAGGAAGATCCCACTACTTATTCTCTGTAACAAAACAGACAAAGTCACTGCTCATACCAAGGAGTTTATCCGCAGACAGTTGGAGAAGGAAATTGATAAATTACGGGCATCAAGAAGTGCAATATCAGATGCTGACGTTACAAATGAGTTCACCCTTGGAGTCCCTGGAgagccattttctttttcccagtGCGTCAACAAAATTACAACCGCTGAAGCTTCTGGTTTGACCGGGGAGATATCACAGTTGGAACAGTTTATCAGAGAAAACGTATA 890 0.4416 MRILGGRWMDDLQIGDLPSLTQSELSPPLCRRCRRPVGPMDEFEQWKEQILHWWSLGLEYLRQVPPTQLYAAVAVLVFTILLLQSIRLFKRGKSNTIVLTGLTGGGKTVLFYQLRDGSYHQGTVTSMEPNEGTFVLHSETTKKGKIKPVRVVDVPGHSRLRPKLDEYLPQAAGIVFVVDALEFLPNCRAASEYLYDILTKGSVVRRKIPLLILCNKTDKVTAHTKEFIRRQLEKEIDKLRASRSAISDADVTNEFTLGVPGEPFSFSQCVNKITTAEASGLTGEISQLEQFIRENV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01162 296 PANTHER TRANSFERRIN 35 296 - -
Bva11g01162 296 ProSiteProfiles small GTPase Arf family profile. 88 292 - -
Bva11g01162 296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 283 IPR027417 -
Bva11g01162 296 Pfam Signal recognition particle receptor beta subunit 93 270 IPR019009 -
Bva11g01162 296 Coils Coil 229 249 - -
Bva11g01162 296 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 35 296 IPR019009 -
Bva11g01162 296 CDD SR_beta 95 294 IPR019009 -
Bva11g01162 296 Gene3D - 89 295 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01162 Bva-Chr11 12635465 12638885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01162 40 296 Miscellaneous Gene Families AT5G05670 72.093 1.87e-135 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01162 K12272 - gmx:100800572 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01162 11 12635465 12638885 Bva11g01162 11 12635465 12638885 ECH