Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01139 ATGGTTATAACTTGGGATAAAGCGGAAAGGAGAGATCAAAGGTTAAGGATCAACAGTGAAGAAGCAGCATGGTTGTCTTCTTTTGCCTTAGTTGATTCTAATAACAGTCAGTGCCCAGTTGGCTTGTGTTATCCTCCAATATCTATCAAGCCAGAGAGTAAACATCTCTTAATTCAAGAAGTTACTCTGTCTTCACCTTCTCCTGTACTCTCTTTTGTGGAGAAAGTGCCTCAAGATGGACAGATTTCTCATGTCACAGCTAGTGATTCAGAAAACCAGTCAAATTCGTCAAGGACCTTGCGGGATGTGCATATTTCAATGCGGTTAATGGAAGACTTCCTTGAACTTGCTAAAGAAAGCACAGAAAAGGATTTGGAAACTTGTGGAATACTTAGTGCCATCCTTGAGAACGGAACCTTTTATATGACCACATTGATCATACCCAAACAGGAGTCAACTTCTAGTTCTTGTCAGGCTACAAGCGAAGAGGAAGTTTTTGCAATTCTAAATGAAAGATCTCTTTTCCTCGTTGGATGGATCcatACACATCCCTCTCAAAGTTGTTTCATGTCTTCAGTAGATCTGCACACTCAATACTCATACCAGGTGATGGTTCCTGAGGCTTTTGCCATTGTCATGGCTCCGACCGATACCACCAGGAGCTGCGGACTATTTCGCCTAACTGACCCCGTTGGGATGGGAGTTCTCAAGAATTGCCAGGAGGAGGGATTTCATCCACACAAAGAACCAGATAGTGGAAGTCCTGTGTATGAGCACTGCTCCAATGTGTACAAAAACTCCAATCTGAGGTTTGAAATCTTTGATTTGCGCTG 833 0.4262 MVITWDKAERRDQRLRINSEEAAWLSSFALVDSNNSQCPVGLCYPPISIKPESKHLLIQEVTLSSPSPVLSFVEKVPQDGQISHVTASDSENQSNSSRTLRDVHISMRLMEDFLELAKESTEKDLETCGILSAILENGTFYMTTLIIPKQESTSSSCQATSEEEVFAILNERSLFLVGWIHTHPSQSCFMSSVDLHTQYSYQVMVPEAFAIVMAPTDTTRSCGLFRLTDPVGMGVLKNCQEEGFHPHKEPDSGSPVYEHCSNVYKNSNLRFEIFDLR 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01139 277 PANTHER FI19924P1 49 277 - -
Bva11g01139 277 SMART pad1_6 102 230 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bva11g01139 277 CDD MPN_AMSH_like 100 277 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Bva11g01139 277 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 100 206 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bva11g01139 277 PANTHER AMSH-LIKE PROTEASE 49 277 - -
Bva11g01139 277 Gene3D Cytidine Deaminase, domain 2 81 277 - -
Bva11g01139 277 ProSiteProfiles MPN domain profile. 103 231 IPR037518 -
Bva11g01139 277 SUPERFAMILY JAB1/MPN domain 103 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01139 Bva-Chr11 12535466 12539035 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01139 K11866 - gmx:100807282 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01139 11 12535466 12539035 Bva11g01139 11 12535466 12539035 ECH