Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01129 ATGCTTGCTGTAATGGCGATGGAGGAACGGAAAGGTACGAAGAGACCTCTGCAACTTGACTTGAATGCTCGCTTGCAGAGCAAAGTAGGCGATGCACCTGCTGAATTGGTTGTTGAGCCTGCTTCCAACACCGCCACTTCTACCTCTCAATCGCAGATTATCTGGACCGCATTTTCCCTGGGAGAAGATGTTGAACTGATGGACGATCACAATATTGTGGAAGCGATTCGCTGCAAGAAACGGTCTCTGGAGACCACAGGTCACAGATTAGCTGACAAAGGAGAGAAGCTTCAGGTTAACATCAAGCGCTTTGAAGAGGAGTTGGAACGGAGGAAAAAAAGACGAATTGAGAAGGAAGCTGATGAAAGTGAGAATCCCATACAAGCTACTTGCTCAAGTGCGGAGCCCAGTGCAGAATTTCTCAAAGGAGGCGACACACCAGTTGAATTGGTTGTTGAGCCTGCTTCCAACACCGCCACTTCTACCTCTCAACAGCAGAATAACTGGACCACGGGCTTCAATCGGCAATTTTCCCCTGCAGACGGTTCAATGGACGATGAATGTCTTGTGGAGGCGATTCGCTCCAAGAAACGCACACTGGAGGCCAATCGTCCCTTTTTGCCTGACAAGGGGGAGAAGCTTCAGGTCTGCGTCAAGCTCTTGGAAGAGGAGTTGGAACGGAGGAAAACTAGACGAATTGAGAAGGGTGAGCCCATTGTTCTTGACGTTGAAAATGAATCTCATCCTCTGGAGAAAATGGAGCAAGAAGACAAATTTGCTGAATGTCTGAAGGAAGCTAAGATATATTATCCTTCCCGTGGTGATGCGGAATCTATCGAAATCTGTTACACAGACATAGAATGCCTTGCTCCTGAACGTTATTTAACGTGTACTATAATGAACTTTTATATACTTTCCGTTAATGTGCAGCAAAGTGAGAGGCAGACATTCTTTCTGACACTTAGAAGGTGGTGGAAGGGTGTGAATATTTTTCAGAAGGCGTATCTTCTAATTCCAATACATGAGGATCTACACTGGAGCTTGGTCATTATTTGCATCCCAGACAAAAATGATGAATCAAGCCTAACCATACTTCATTTGGATTCATTGGGTTTTCACTCAAGTACATCAGATTCTTACAACATAAGAAGCTATTTGGACCGAGATTGTCTGTCTTCAGATATTCCAATTGCCCACCGAATATGGAACAATCTTCCACGTAGAATTGATGCTAAAATTGCTGCGGTTCCGCAACAGAAGAACGACTATGACTGTGGTGTCTTTGTACTCTACTTCATTGAGCGTTTCCTTGAAGATGCTCCTCAAAGACTGAAAAAGCAAGGTTTGGCGatgTTTGGCAAGAAGTGGTTCAAACCTGAAGAGGCATCCAATCTAAGAGTTAAGATCCATAAATTACTTAGATA 1424 0.4431 MLAVMAMEERKGTKRPLQLDLNARLQSKVGDAPAELVVEPASNTATSTSQSQIIWTAFSLGEDVELMDDHNIVEAIRCKKRSLETTGHRLADKGEKLQVNIKRFEEELERRKKRRIEKEADESENPIQATCSSAEPSAEFLKGGDTPVELVVEPASNTATSTSQQQNNWTTGFNRQFSPADGSMDDECLVEAIRSKKRTLEANRPFLPDKGEKLQVCVKLLEEELERRKTRRIEKGEPIVLDVENESHPLEKMEQEDKFAECLKEAKIYYPSRGDAESIEICYTDIECLAPERYLTCTIMNFYILSVNVQQSERQTFFLTLRRWWKGVNIFQKAYLLIPIHEDLHWSLVIICIPDKNDESSLTILHLDSLGFHSSTSDSYNIRSYLDRDCLSSDIPIAHRIWNNLPRRIDAKIAAVPQQKNDYDCGVFVLYFIERFLEDAPQRLKKQVWQEVVQT 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01129 455 SUPERFAMILY Cysteine proteinases 257 443 IPR038765 -
Bva11g01129 455 MobiDBLite consensus disorder prediction 115 140 - -
Bva11g01129 455 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 240 447 - -
Bva11g01129 455 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 62 156 - -
Bva11g01129 455 Coils Coil 94 121 - -
Bva11g01129 455 Pfam Ulp1 protease family, C-terminal catalytic domain 308 452 IPR003653 GO:0006508|GO:0008234
Bva11g01129 455 PANTHER UBIQUITIN-LIKE PROTEASE 4 62 156 - -
Bva11g01129 455 PANTHER UBIQUITIN-LIKE PROTEASE 4 240 447 - -
Bva11g01129 455 ProSiteProfiles Ubiquitin-like protease family profile. 279 436 IPR003653 GO:0006508|GO:0008234
Bva11g01129 455 Gene3D Adenoviral Proteinase; Chain A 238 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01129 Bva-Chr11 12474792 12481613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01129 K16287 - csin:114320290 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01129 11 12474792 12481613 Bva11g01129 11 12474792 12481613 ECH