Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01127 ATGGCACTTAGCCAAGAAAAGTTACTCCTTTCTGCTCTCCTAATCCTCTGCTTAACAATTGAGGTTTCCTCGCACAACAGGCGTTTTACAACTCCTAGTGTCACACGTTTGACGGATTCTTTTCCTCGTGTCCCAGTTGATCGTGGCTATTCTAAAGCTTTTGGGGCCCCAAATATCCAAATTCTCAACAATGGGTCCATGGCCACTCTTGCTCTTGACAAAACCACAGGCTCTGGCTTGGTCTCTAATGGCAGATTTTACTATGGATTCTTCAGTGCTGCTATCAAGTTACCGGCTGGTCTATCCCCTGGAGTAGTAGTAGCCTTCTACTTGTCAAATGCAGATAAATTCCCTCACAACCATGATGAGATTGATATTGAACTACTTGGTCATGATAAGAGAAACGATTGGGTCATTCAAACAAACGTCTATGCCAATGGGAGTGTGAGCacaggaagagaagaaaaattctaTCTCTGGTTTGACCCAACACAGCAGTACCACTATTACAGCATCTTATGGAACAACTATCACACAGTGTTTTTCGTGGACAATATTCCGGTGAGAGAGTTTCTACATAGCAGCAAGTATCCTTCTGTGTATCCCTCAAAGCCAATGTCAGTCTATGCCACAATATGGGATGGATCAGAATGGGCTACCCATGGAGGAAAATatggaattaattataagtacGCACCATTTGTAGTTTCATTTGCAGAAATGGAGTTAAGTGGCTGCTTATCCAATCCCACAGCTCcagcttcttcttgttctAAGGCCACCACTTCTAGCTCAGACCCTGTTAATGGACCAGAGTTTACTAAGCTATCACAGCAGCAAATAGCAGCCATGGATTGGGCAAGAAGGAAACTCATGTTTTACTCCTACTGTAATGATAAACCAAGGTTCAAAGTTCTACCACCAGAATGCCAGTATTA 938 0.4094 MALSQEKLLLSALLILCLTIEVSSHNRRFTTPSVTRLTDSFPRVPVDRGYSKAFGAPNIQILNNGSMATLALDKTTGSGLVSNGRFYYGFFSAAIKLPAGLSPGVVVAFYLSNADKFPHNHDEIDIELLGHDKRNDWVIQTNVYANGSVSTGREEKFYLWFDPTQQYHYYSILWNNYHTVFFVDNIPVREFLHSSKYPSVYPSKPMSVYATIWDGSEWATHGGKYGINYKYAPFVVSFAEMELSGCLSNPTAPASSCSKATTSSSDPVNGPEFTKLSQQQIAAMDWARRKLMFYSYCNDKPRFKVLPPECQY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01127 312 Gene3D - 30 310 - -
Bva11g01127 312 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 274 310 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Bva11g01127 312 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 311 IPR013320 -
Bva11g01127 312 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 39 238 IPR000757 GO:0004553|GO:0005975
Bva11g01127 312 PIRSF EndGlu_transf 7 312 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva11g01127 312 Pfam Glycosyl hydrolases family 16 58 230 IPR000757 GO:0004553|GO:0005975
Bva11g01127 312 CDD GH16_XET 47 310 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bva11g01127 312 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED 3 311 - -
Bva11g01127 312 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 3 311 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01127 Bva-Chr11 12467304 12468696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01127 11 311 Glycoside Hydrolase AT1G10550 62.951 1.52e-147 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01127 K08235 - gmx:100778993 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01127 11 12467304 12468696 Bva11g01127 11 12467304 12468696 ECH