Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01108 ATGGGTAAGAATCTGCTCGTGTTGGGACTCACTGTTTTGGCTCTGTTTGGAGGCGTCTCTTCAGCACCATCTACTACTTCCCCTGCAAAGATTGTTAGTGGCTTGGTCTCAAATGCTGTGCCTGCTTTGACGAAATGGTTGTGGTCACTGAAAGCAACCACCAAAACAGCGATTACTGGCCGTCCGATGATGAAGTTCGAGAGTGGATATACTGTGGAGACGGTGTTTGATGGAAGCAAGCTTGGTATAGAGCCTTACGCTGTTGAGATGTTACCCAATGGGGAGCTTCTGATTCTGGATTCAGCTAATAGTAATATGTACAGGATTTCCTCCTCGCTTTCCATATATAATAGGCCAAAGCTGGTGGCAGGATCTGCTGAAGGATATTCTGGTCATGTCGATGGGAAGCTCAGGGAGGCTAGAATGAACCACCCAAAGGGGGTAACCGTTGATGACCGAGGAAATATCTATGTTGCAGATACTATGAATATGGCAATTAGGAAAATCAGTGATTCGGGGGTCACTACTATTGCTGGAGGAAAATGGAACCGTGGAGGGGGCCATGTTGATGGACCAAGTGAAGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTATGTTGGAAGCAGTTGTTCCCTACTCGTCATAGATAGAGGAAACCGAGCCATAAGGGAGATTCAACTTCATTTTGATGACTGTGCTTATCAATATGGAAGTGGATTTCCTCTTGGGATTGCAATGCTTATTGGGGCTGGCTTCTTTGGTTATATGATGGCATTGCTGCAACGTAGACTTGGAACAGTTGTAACACCGCAGGATGATCAGGGTCCAACAATGTCTAGTATTCTAGCAAGTCCATATCAGAAGCCCTTGAAATCTGTCAGGCCTCCCTTAATTCCAACAGAAGATGAGCCTGACAAGCAACAAGAAGGTTTCTTCGGATCCCTTGGAAAGCTTCTTACTAATGCCGGGGCATCAATGGTGGAGATAATGGGGGGAATATTTCCTGGTTTTAGGAAGAAGCCCTTGAACTATCAATTTCAAAGCCAGCCACTGCTCCAGCAACAGCAAAAACATGTCAATCCTTGGCCTGTGCAAGAAAGTTTTGTGATTCCCGATGAAGATGACCCTCCTTCTATTGACACCAGAAGCCCAACCCCTCGAAAAACATATCCTTTCATGTCCAAGGATGCAGAAAAAATGCAACAACTGCGTCAAAGCAGAGCTTTCTATAGTGGATGGGATGGAGATTCTCAGCAGCACCAGCAACAACAGAAACATCATCATCGTCATCAGTATCGTTCCTCAATCCCTCATATTTACTATGAGCAAAACAATGAGACAACCAATGAGATAGTCTTTGGGGCAGTGCAGGAGCAGCAGGATGGGAAGCGTGAATCCATGGTTATCAAGCCTGTTGATTATGGTGGATCCCTGTATGATCATCAAAACCATGGTGGATCCCTGTATAATCATCAAAACCTTCGATCTCGAATCAATTCCATGGGCTATACCCTCAGGTATTG 1526 0.4502 MGKNLLVLGLTVLALFGGVSSAPSTTSPAKIVSGLVSNAVPALTKWLWSLKATTKTAITGRPMMKFESGYTVETVFDGSKLGIEPYAVEMLPNGELLILDSANSNMYRISSSLSIYNRPKLVAGSAEGYSGHVDGKLREARMNHPKGVTVDDRGNIYVADTMNMAIRKISDSGVTTIAGGKWNRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLIGAGFFGYMMALLQRRLGTVVTPQDDQGPTMSSILASPYQKPLKSVRPPLIPTEDEPDKQQEGFFGSLGKLLTNAGASMVEIMGGIFPGFRKKPLNYQFQSQPLLQQQQKHVNPWPVQESFVIPDEDDPPSIDTRSPTPRKTYPFMSKDAEKMQQLRQSRAFYSGWDGDSQQHQQQQKHHHRHQYRSSIPHIYYEQNNETTNEIVFGAVQEQQDGKRESMVIKPVDYGGSLYDHQNHGGSLYNHQNLRSRINSMGYTLRY 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01108 508 MobiDBLite consensus disorder prediction 369 392 - -
Bva11g01108 508 ProSiteProfiles NHL repeat profile. 143 172 IPR001258 GO:0005515
Bva11g01108 508 PANTHER NHL REPEAT PROTEIN 1 508 - -
Bva11g01108 508 Pfam NHL repeat 143 168 IPR001258 GO:0005515
Bva11g01108 508 Gene3D - 27 227 IPR011042 -
Bva11g01108 508 PANTHER - 1 508 - -
Bva11g01108 508 SUPERFAMILY NHL repeat 71 229 - -
Bva11g01108 508 MobiDBLite consensus disorder prediction 414 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01108 Bva-Chr11 12361012 12364215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01108 - - gmx:100781836 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01108 11 12361012 12364215 Bva11g01108 11 12361012 12364215 ECH