Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01098 ATGCTTCGTGCAGCTGCGTTTCCAGCGCCTTGCAATTCAATGTCTCTACACACTCTAGGCGCTACTCAGACTGATGCTTCTCTTTCTATGACATTTACAAGCAAAGCTaacttctctcttctctcgGGCGCAACTCTTTGCTTCAGAAGCAGTGCTTTTCTCTCTTCCGTACAACAATTCCAGCAATGTCGTTTGAATTCTCTTGTGTTGAAGGGTAATGGATTGGGCGTAGGCGCTGTGAAGAAGGGAGGGCAAAGTGATGGTGTTGGGCTCATGGAaatggatgattttgatgatgaagatgatggtGATTTTTTTGATGAGGATGGTGATGTCGATGGTGAGGAAGATGTGGTTCTCCCAGTTGAGCAGATGAAGAATTTGCTAAAGAACAAACCCAGGGGATTTGGCGTGGGGAAGGTTTATGACACTTCTATTGAGGATAAGCTGCTCGAAGAAATTCAGCAGAGTGAAAAAGCGCAGGCtgctaatataaataaacttaagaACGACCCAGTAAAAGCTAgttccaaaaaaaatgatcaaaacaAGACAGCCCCAGAAATTGTACGAAGTGGAGTTCGAGTAAGATTGTTGAACCtaccaaagaagaagaacatcCATAGGGATTTAAAATCAGCTTTCCAGGGGATTCCAGGCATAATTGATATAATCCCTGTTGTTTCTGGAAACAAGAAGACTAGGGATCCCATCTGCAGGGGCTTTGCTTTTGTTGATTTCAAGTGTGAAGAAGATGCAGCCATGTTTGTACAATTATACTCTGGGCAAAGTATTGCCTTTGGTAAAATTCAGAAGCAGATAAATTGTGAGCTGCTGAAATCACAATCTTCCTCTTCTGCTGGTCTAGAACTAAGTGAAACTCTTAACACTGCTCCACAGCTGGTAGTCCCTGCCTTTGAAGATTACCCAAGTGAGGGTTATTATTTGGATGATCCTGCCCTCAACTCCTGGGATGGAGTCATTTCGTATGATTCTGGCGAACTCGGTAAGCAGATAGATACAGAAGAAGTGGAAGACTTTGAAGAGAATGAAGAGCCCTTTGCTGCCTTGGAAGCAGATAGTGATGATGATGCTGAAACTAATTTACTTTCCTCTGAGCAGGAGTCACCTTCCAAACTTAAAATGGAGAAtgtttcaaagaaaaagtcaGCTTCCAAGGATAAAGCCAAAAAACTTCCCAAGTTGGATGTTCCTGGATCTGCAAAGAGGCTAAAGATCAAGGAGAAGGCAGTTTTGAGTGATGTTTTCTCGAAATATGGATTAAAATCTACTCTTGTTTCAAAGGATAATTCGTA 1316 0.3891 MLRAAAFPAPCNSMSLHTLGATQTDASLSMTFTSKANFSLLSGATLCFRSSAFLSSVQQFQQCRLNSLVLKGNGLGVGAVKKGGQSDGVGLMEMDDFDDEDDGDFFDEDGDVDGEEDVVLPVEQMKNLLKNKPRGFGVGKVYDTSIEDKLLEEIQQSEKAQAANINKLKNDPVKASSKKNDQNKTAPEIVRSGVRVRLLNLPKKKNIHRDLKSAFQGIPGIIDIIPVVSGNKKTRDPICRGFAFVDFKCEEDAAMFVQLYSGQSIAFGKIQKQINCELLKSQSSSSAGLELSETLNTAPQLVVPAFEDYPSEGYYLDDPALNSWDGVISYDSGELGKQIDTEEVEDFEENEEPFAALEADSDDDAETNLLSSEQESPSKLKMENVSKKKSASKDKAKKLPKLDVPGSAKRLKIKEKAVLSDVFSKYGLKSTLVSKDNS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01098 438 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 25 437 - -
Bva11g01098 438 CDD RRM_SF 196 271 - -
Bva11g01098 438 Gene3D - 169 287 IPR012677 -
Bva11g01098 438 SUPERFAMILY RNA-binding domain, RBD 181 266 IPR035979 GO:0003676
Bva11g01098 438 MobiDBLite consensus disorder prediction 380 403 - -
Bva11g01098 438 Coils Coil 151 171 - -
Bva11g01098 438 MobiDBLite consensus disorder prediction 165 186 - -
Bva11g01098 438 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 194 281 IPR000504 GO:0003723
Bva11g01098 438 SMART rrm1_1 195 273 IPR000504 GO:0003723
Bva11g01098 438 MobiDBLite consensus disorder prediction 356 403 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01098 - - gmx:100786279 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01098 11 12295974 12298537 Bva11g01098 11 12295974 12298537 ECH