Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01087 ATGTCCGATAGTTCGAGGGCCCGAGTTACTATTACGCTTGGGCGTAGTGGTCAGGTTGTCAAGAGGGATTTATCTACAGCGGTGGATTCTTTCCATTCATCTCTTTCCACAGCTGGGACTAAGCGGTCTGTAAGAGATAGAATTGGAAATAATGCAGGCAGTTCCTTATGGAATGGGAACCAACTCAGCGGCAATAAACGACAACGAGGAGCTATAAGCATGCAAAATGGGTTGGCTGGTAATGCAACAATTGGCAAAGATGATCTTCGATTAAAGCTCATGAAGAAAAGTGCATCAAGAGGGGCAGAAAGCAACTGTGATAGGAAGCCCATAGACCTCCGTGAAAAACTATCAAAGGCAGCTCAACCCTCAATGACCCGTGTTAATTCAAAGCAGCCCATGCCAGAACCAAGGGAAAGAAATGTGTTGAGGCGAATCCCCTCGGCTAGAAGTTCTGATGATTTACCTCGTATGGAATCAATGAGAAGCTCATACTCTCCTTGGACATTGGATCATATAAGACGAAGATCACCAGATGGATTTCCAAGTACTTCTAGGGGCATTTCTTCCCAAAGAAATGTGGAAGATCTGCAGAGGCGGCCATTAAACAGGACATATGATGGTGTTAGGTCAGTTCCATATGTAACAAGGGATGCTCTTGAGCCTTCAAGGCCTCCAACCACTGCACCTGCATCTTTCTTGGCACACACCACTGCATCCACATTGCCTCCTGTAACTGCTAAGTCTGTAGCACCACATATTGGCCAACTGCCTCCACAAAGCAGCATTACACAGAGGACTCCATATTCGGGCGATGCACCCCAAACTGTTGATGGCCTGTTAAATGCATTGGGATTGGGAAAATATGCCCTTATCTTCAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGACCTTAAGGAGCTTGGAATTCCAATGGgtccaaggaaaaaaattcttcttgcTCTCTTGCCTCGAGCCAAACGTCAGTCGTG 1010 0.4525 MSDSSRARVTITLGRSGQVVKRDLSTAVDSFHSSLSTAGTKRSVRDRIGNNAGSSLWNGNQLSGNKRQRGAISMQNGLADATIGKDDLRLKLMKKSASRGAESNCDRKPIDLREKLSKAAQPSMTRVNSKQPMPEPRERNVLRRIPSARSSDDLPRMESMRSSYSPWTLDHIRRRSPDGFPSTSRGISSQRNVEDLQRRPLNRTYDGVRSVPYVTRDALEPSRPPTTAPASFLAHTTASTLPPVTAKSVAPHIGQLPPQSSITQRTPYSGDAPQTVDGLLNALGLGKYALIFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRAKRQS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01087 335 Pfam SAM domain (Sterile alpha motif) 272 327 IPR001660 GO:0005515
Bva11g01087 335 MobiDBLite consensus disorder prediction 35 64 - -
Bva11g01087 335 MobiDBLite consensus disorder prediction 171 194 - -
Bva11g01087 335 Gene3D - 274 335 IPR013761 -
Bva11g01087 335 ProSiteProfiles SAM domain profile. 271 334 IPR001660 GO:0005515
Bva11g01087 335 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 334 - -
Bva11g01087 335 SMART SAM_4 268 333 IPR001660 GO:0005515
Bva11g01087 335 MobiDBLite consensus disorder prediction 117 159 - -
Bva11g01087 335 PANTHER OSJNBA0060P14.15 PROTEIN 1 334 - -
Bva11g01087 335 SUPERFAMILY SAM/Pointed domain 268 327 IPR013761 -
Bva11g01087 335 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01087 Bva-Chr11 12246598 12251163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01087 245 327 Glycosyltransferase AT3G07170 48.193 5.15e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01087 - - lang:109333210 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01087 11 12246598 12251163 Bva11g01087 11 12246598 12251163 ECH
Bva11g01087 11 12246598 12251163 Bva03g01205 03 11863646 11867437 ECH