Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01078 ATGCGGAAGTTCCGGTTGTGTGTCGTCGTTTTGCTGGGCCTGCTCTATCTGCTATTCCCGCCGTTCTGCCTCGGGATTCGTTCGTTTCCGACCCGGCGCGTCGGCGAGGGCGATGGGTTGGAAATGGGCTTCGAAGGTTCGTTTCAGTTCGTTGAAGCGCCGGACTACCGTAATGGAGCAGAGTGCCCTTTTTCCAGCAACAGGGAATTGGGTTTGTCTTGCGATCCTTCTCTTGTTCACATCGCCATGACTTTGGATTCTGGGTACCTGAGAGGCTCCATTGCCGCCGTTCATTCCGTTCTCAGACACGCTTCCTGCCCTGAAAATGTCTTTTTCCACTTCATTGCAGCAGAGTTCGACCCGACGAGTCCTCGGGTCTTGACCCAGCTAGTCCGATCCACCTTCCCTTCGCTCAATTTCAAAGTTTACATTTTCAGAGAAGATACAGTGATCAACCTTATCTCTTCGTCCATTCGCGAAGCCCTCGAGAACCCACTGAACTACGCGAGGAACTATCTGGGTGATATTCTAGATGGATGTGTTGACCGAGTTATCTACCTTGACTCTGACGTGGTCGTGGTCGATGACATTCACAAGCTCTGGAACGTGACGCTCACTGATTCACGAGTCATCGGGGCACCCGAGTACTGTCATgccaacttctccaattactTCACCGATAGGTTCTGGTCCGACCCGGTTCTTTCTCGGGTCTTCTCTTCGAGGAGGCCCTGTTATTTCAACACTGGGGTGATGATAATGGATTTGGTGAGGTGGAGGGAAGGGAATTACCGGAAGAGGATAGAGAATTGGATGGAGttgcagaggaagaagaggattTACGAGCTGGGTTCTCTCCCACCTTTCTTGGTTGTCTTTGCTGGGAACGTGGAGGCGATCGATCACCGGTGGAACCAGCATGGGTTGGGTGGAGATAACATCAATGGCATTTGCAGATCTCTGCACCCTGGCCCCGTGAGTCTCTTGCATTGGAGTGGTAAAGGGAAGCCATGGGTGAGGCTGGACGCCAAGCAACCTTGCCCGTTGGATAGTCTATGGGAGCCTTATGATCTGTACAAGCCACAGCACCATAAGAACAGAGCAAGGGATTA 1112 0.5045 MRKFRLCVVVLLGLLYLLFPPFCLGIRSFPTRRVGEGDGLEMGFEGSFQFVEAPDYRNGAECPFSSNRELGLSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHASCPENVFFHFIAAEFDPTSPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDGCVDRVIYLDSDVVVVDDIHKLWNVTLTDSRVIGAPEYCHANFSNYFTDRFWSDPVLSRVFSSRRPCYFNTGVMIMDLVRWREGNYRKRIENWMELQRKKRIYELGSLPPFLVVFAGNVEAIDHRWNQHGLGGDNINGICRSLHPGPVSLLHWSGKGKPWVRLDAKQPCPLDSLWEPYDLYKPQHHKNRARD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01078 370 Pfam Glycosyl transferase family 8 80 340 IPR002495 GO:0016757
Bva11g01078 370 SUPERFAMILY Nucleotide-diphospho-sugar transferases 79 362 IPR029044 -
Bva11g01078 370 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 8 362 - -
Bva11g01078 370 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 8 362 - -
Bva11g01078 370 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 80 354 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01078 Bva-Chr11 12204080 12205562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01078 3 370 Glycosyltransferase AT1G70090 75.000 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01078 - - jre:109008666 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01078 11 12204080 12205562 Bva11g01078 11 12204080 12205562 ECH