Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01076 ATGTCTGTCCCCTCCAAGCGCTACTCGCTGAGTCCACCTCAACGTGCTTCAACAGCTGGGTCGACTCATGATCTCAAGCAACGAGTCATCACCTGCCTCAACAAGCTCTCCGACCGCGACACCCTTGCCATGGCCGCCGGAGAGCTTGAGTCCATTGCTCGGAGCTTGAGGCATGACTCCTTCTCTCCTTTCCTCAACTGCATTTACAACACTGACGCTTCTTCTAAATCGCCGGTTCGGACACAATGCGTTCACCTCTTGACGGTTCTCTCTCAGTTTCACGGAGACGCCCTCGCCCCTTTCGTTCCGAAGATGATATCCACCCTCCTCCGTCGCCTCCGCGACCCTGACTCCGCCGTCAGATCGGCTTGCGTTGATGCTGTCACTGCAATGTCGTCGCTGATCACGAAACCGCCGTTCTCCGTGGCTTTTCTGAAGCCGTTGATGGAGACTCTGACGCAGGAGCAGGATGTGAACTCGCAGTTCGGTGCGGCGCTGTGTCTTGCTGCAGCAATTGAATCGACGCCGGAGCCGGATGCGGAATTGTTGCGGAAGTCTACTTTGCCGAGGTTGGGGAAGTTGGTGAAGAATGAGGTGTGCAAGGCGAAGGCTCCGCTGTTGGTTCTAATCGGGAGTATCATTGGTGTTGGTGGCGCCTCGAGTCGGGGAGTGTTGAATTGGTTAGTGCCTTGTCTCCTTGAGTTTTTGAGCAATGAGGATTGGACGGTGAGAAAGGCAGCGGCTGAGGCGTTGGGAAAGGTGGCTTTCGTGGAGAAAGATTTGGCATGGCAATACAAGGCACAGTGCTTGGGTTCCTTCCAAAATCGTAGATTCGATAAGATCAAGGTAGTTCGAGAGACTATGAATCGTACCTTTGAGATGTGGAAGGGGGTAACTGATGCATCTGAGAGTGTTTCTTCTCCAGCTAAATCCACGTGTTCTTTAGCTGATAATGAAGAAGGTCAGTGTGTCACCACCAAAAGTGGAACTAATGTTGGTTTTAAATCTTCTCTACCAAAGAAAACAGTTCCAATGAACAGGTTACCTCCACCTACAGTTTCATGTTTATCCGCCAAAAGAGAGAGCCCTCTAAAGAGTACTGGCAAACCTTCAAGCATAGGGAGATCACTCGAGCGGGACAATGACAAATTCTCTGCTCAGAAACATGAGACTAGAGAATCATGTGTGCCTTCTTTGAACATGGCTAGTGAAGATGACATCAAAGGGTGTGACATTGAAGTTTCTACACCAATACAGAATCAGAATTCTGGAAACTCAAGGGCTGAGATAAAGCGTATCCTCTTCAGCAAGAGTTCTGATGAAAAAGTCCGGAAAGTTGGTGGTTTGAGATCTGGGTCTCGTGTGGTTCCATTTCATGATGATGACTTTCCTCACTCAGGTATCACGGTTAACAATGCCAATGAAGTTTGTGAGAACTCCCAAGATGCTGAGGATTTATCCTTGATCCGGGAACAGCTTATTCAAATTGAAAACCAGCAATCTAATCTCCTGGACCTCCTCCAGAGATTTATTGGAAGCTCCCAAAGTGGGTTGAATTCTCTGGAGACACGTGTACATGGTCTAGAAAGGGCTCTAGATGAAATGTCATATGACTTGGCAGTTTCTAGTGGCAGGATTCCTGGAATGGAGTCGTCCACACAAGATATGTGTTGCAAGCTACCTGGCGCTGAATTTTTGAGTTCCAAATTCTGGAAGAGGACAGATGGGCACTATTCTACGTCAAGGCTTTCCTTAGGAAGCATAGCATCACCCAAATATGTGCATAATGCAACTGATATTGATCCTAGCCTCGAAACTTTCACTACAAGCAGCAGAAGATTTCAACATCGTAGGGGTGAATTATTTGTGAACCCACTGGCCGTAGGCGGAAGTAATTTGAATGAGTATTTAGGGCAATACTCATATAAAACGCCCAAGAAAATGGTCCAAGAGGCAGATATACCTGAAAGTAACAATACCTGCCAGCTTGATGATTTTTCATCGGTTACTTCAGCCGCCCCAAGGAACCAGCACTGCAGATCATCCGTTTA 2051 0.4793 MSVPSKRYSLSPPQRASTAGSTHDLKQRVITCLNKLSDRDTLAMAAGELESIARSLRHDSFSPFLNCIYNTDASSKSPVRTQCVHLLTVLSQFHGDALAPFVPKMISTLLRRLRDPDSAVRSACVDAVTAMSSLITKPPFSVAFLKPLMETLTQEQDVNSQFGAALCLAAAIESTPEPDAELLRKSTLPRLGKLVKNEVCKAKAPLLVLIGSIIGVGGASSRGVLNWLVPCLLEFLSNEDWTVRKAAAEALGKVAFVEKDLAWQYKAQCLGSFQNRRFDKIKVVRETMNRTFEMWKGVTDASESVSSPAKSTCSLADNEEGQCVTTKSGTNVGFKSSLPKKTVPMNRLPPPTVSCLSAKRESPLKSTGKPSSIGRSLERDNDKFSAQKHETRESCVPSLNMASEDDIKGCDIEVSTPIQNQNSGNSRAEIKRILFSKSSDEKVRKVGGLRSGSRVVPFHDDDFPHSGITVNNANEVCENSQDAEDLSLIREQLIQIENQQSNLLDLLQRFIGSSQSGLNSLETRVHGLERALDEMSYDLAVSSGRIPGMESSTQDMCCKLPGAEFLSSKFWKRTDGHYSTSRLSLGSIASPKYVHNATDIDPSLETFTTSSRRFQHRRGELFVNPLAVGGSNLNEYLGQYSYKTPKKMVQEADIPESNNTCQLDDFSSVTSAAPRNQHCRSSV 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01076 683 Coils Coil 518 538 - -
Bva11g01076 683 ProSiteProfiles HEAT repeat profile. 228 255 IPR021133 -
Bva11g01076 683 Gene3D - 19 365 IPR011989 -
Bva11g01076 683 MobiDBLite consensus disorder prediction 359 374 - -
Bva11g01076 683 Pfam HEAT repeat 106 133 IPR000357 GO:0005515
Bva11g01076 683 Pfam HEAT repeat 228 255 IPR000357 GO:0005515
Bva11g01076 683 MobiDBLite consensus disorder prediction 375 390 - -
Bva11g01076 683 SUPERFAMILY ARM repeat 29 288 IPR016024 -
Bva11g01076 683 MobiDBLite consensus disorder prediction 1 22 - -
Bva11g01076 683 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 5 656 - -
Bva11g01076 683 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 656 IPR033337 GO:0005874|GO:0008017
Bva11g01076 683 MobiDBLite consensus disorder prediction 354 396 - -
Bva11g01076 683 Coils Coil 489 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01076 Bva-Chr11 12190856 12194775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01076 - - mtr:MTR_5g036950 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01076 11 12190856 12194775 Bva06g01295 06 9814148 9817392 BWGD
Bva11g01076 11 12190856 12194775 Bva11g01076 11 12190856 12194775 ECH