Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01042 ATGAAGGCCATTCTGCCCAAGTTGGACCCTCTCTTCCTGCTCCCTTCACTCTTTAAATCTCCCACCAGTCATCCCCCTTTTCCCCTCTTAACCATACTCCTCTCAGCACAGATCCAATCCACTAAACCCAACTTGgacagaaaagaagagaaagaagaaagccaTGGAATTAGAAGGACACCAATCCAGCACATGGGCAGGATATGTGGACTGGAGGAACAAACCTGCTCTCCGGGCCGCCATGGCGGCATGGCCGCTGCCTCTTTCGTTCTGGTGGCAGAGATATTGGAGAATCTGGCATATTTAGCCAATGCTAGCAATTTGGTTTTGTATCTGAGGCAATTCATGCACTTATCCCCTTTAGAATCAGCCAACAATGTCACCAATTTCATGGGAACAGCCTTTCTGCTTGCCCTCCTTGGTGGTTTCTTATCTGATGCCTTTTTCACCGCTTATCACATCTACTTGATAAGTGCAATGATTGAGTTCCTGGGCCTGGTCATACTGACTATACAAGCTCGCATACCTGGTCTAAGGCCACCAGCATGTGGTGGATCCACACCTAGCCAATGCCAAGAAGTTGATGGTGGAAAAGCAGCAATGTTGTTCGGTGGGCTGTATCTGGTGGCACTGGGTGTTGGAGGAATTAAGGGTTCATTGCCAGCACATGGAGCAGAGCAATTTGATGAGACTACCCTAACTGGGAGGAAGCAGAGATCAACCTTCTTCAACTACTTTGTCTTCTGCTTATCTTGTGGTGCCCTTATTGCAGTCACATTTGTAGTGTGGGTCGAAGACAACAAGGGTTGGGAATGGGGTTTTGGAATCTCAACCATTAGCATCTTTGTTTCTATCCCAGTCTTCTTGCTTGGCTCTGCTATTTATAGGAACAAGATACCTTGTGGAAGTCCacttacaaatattttcaagGTTTTAGTTTCTGCTACACTTAATAGCTACAGAAATTCCACCAGTGCTGTGGTGGTGAACATGGCTTCAAGCCCTTCTAATCCTAaatcaaacagaaaagaaccagaagcagaagcagaaacGGAAACTTCTAAAGCAAGCACGGCAATCGAAACCCCATCAGATTCCCTCAAATTCCTCAATGCCGCAGTTGCAAACAAGCCAGTCCACTCATCCCTAGAATGCAGTGTCCAACAAGTAGAAGATGTGAAAATAGTGTTAAAAGTTCTCCCCATTTTTGCTTGCACCATCATGCTCAATTGCTGCCTAGCTCAGCTTTCGACATTCTCCGTTGAACAAGCTGCTACCATGAACACCAAACTTGGTTCCCTAAAGGTGCCACCAGCTTCCTTGCCAATTTTCCCAGTACTCTTCATCATGATCCTTGCACCAATTTATGACCACATAATCATCCCGTTTGCGCGAAAAACGACAAAATCAGAGATGGGAATAACCCATTTGCAGAGAATTGGAATTGGGTTAGTCCTCTCTATAGTTGCCATGGCAGTGGCAGcactagttgaaataaagagaaaaagagtagCCACCCATTATGGGCAACTTGATGATCATACCAAGCCACTACCCATCACATTCTTTTGGATAGCTTTTCAGTACTTGTTCCTTGGTTCAGCAGATCTCTTCACACTGGCGGGTTTATTGGAATTTTTCTTCACAGAAGCACCAATAAGGATGAGGTCTTTGGCCACATCTCTTTCTTGGGCATCTTTGGCTATGGGATATTATCTCAGCTCAGTCATTGTATCAATAGTGAATAGTGTAACAGGGAACTCCAACCACAGGCCATGGCTATCTGGTGCAAACCTTAACCATTATCACCTTGAGAGGTTCTATTGGCTAATGTGTGTGCTAAGTGGTTTGAATTTCTTACATTACCTCTTTTGGGCAATGAGGTACAAATACAGAGGCACAGGAACTAGCAGTGAATA 1919 0.4283 MKAILPKLDPLFLLPSLFKSPTSHPPFPLLTILLSAQIQSTKPNLDRKEEKEESHGIRRTPIQHMGRICGLEEQTCSPGRHGGMAAASFVLVAEILENLAYLANASNLVLYLRQFMHLSPLESANNVTNFMGTAFLLALLGGFLSDAFFTAYHIYLISAMIEFLGLVILTIQARIPGLRPPACGGSTPSQCQEVDGGKAAMLFGGLYLVALGVGGIKGSLPAHGAEQFDETTLTGRKQRSTFFNYFVFCLSCGALIAVTFVVWVEDNKGWEWGFGISTISIFVSIPVFLLGSAIYRNKIPCGSPLTNIFKVLVSATLNSYRNSTSAVVVNMASSPSNPKSNRKEPEAEAETETSKASTAIETPSDSLKFLNAAVANKPVHSSLECSVQQVEDVKIVLKVLPIFACTIMLNCCLAQLSTFSVEQAATMNTKLGSLKVPPASLPIFPVLFIMILAPIYDHIIIPFARKTTKSEMGITHLQRIGIGLVLSIVAMAVAALVEIKRKRVATHYGQLDDHTKPLPITFFWIAFQYLFLGSADLFTLAGLLEFFFTEAPIRMRSLATSLSWASLAMGYYLSSVIVSIVNSVTGNSNHRPWLSGANLNHYHLERFYWLMCVLSGLNFLHYLFWAMRYKYRGTGTSSE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01042 639 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 72 634 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva11g01042 639 SUPERFAMILY MFS general substrate transporter 87 630 IPR036259 -
Bva11g01042 639 PANTHER PROTEIN NRT1/ PTR FAMILY 4.7 72 634 - -
Bva11g01042 639 Pfam POT family 156 593 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva11g01042 639 MobiDBLite consensus disorder prediction 331 360 - -
Bva11g01042 639 CDD MFS_NPF4 84 628 - -
Bva11g01042 639 Gene3D MFS general substrate transporter like domains 63 636 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01042 Bva-Chr11 11975719 11980820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01042 79 638 Organic Solute Cotransporters AT1G69850 74.382 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01042 - - lja:Lj2g3v1339020.1 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01042 11 11975719 11980820 Bva11g01042 11 11975719 11980820 ECH