Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01035 CTTTTCCTTGCTAAACGAATAACGATCATGTCGACCGTTAACTTAGAGCCTCTCTTCCACCGCTGTCGCAGAGAGATTCCAGTTTATCGTCCCAAATCAAAGGCACTCAATTTCAAGCCTTGCTTTGTGAATTGCTGCTCTTTCAAGCTCTTCGTTCCCGATGTGAGGAGCTTCTGCAACTTCAGGCCACCCCATATTCACAGGTCTCCTACCGTAGCAGCTGCCTCTACAGACACAGCTACCTTGGATTCCTTTCAATCCACTGGCGATGTCTTATTCAGGGAGACTTACCCTGCTAACCAAACTGAAATGGTTCGTCTGAGCTTTGCATTCACTTTTCGTCTTATCCTTTCTGGGATTTATTTGGTTTTCCAGAAAgtgagggaaagaaaagaatttttaaatttttttttctaaattcaaGGAAATGTTGGTAATAAAGTGAAGAAGCTGAAGGAGGTCAGATTTTCGTTTTGCACTATCTTCTTTTTCGCGAaaataaaaggggaaaaagttGGATTCAACTGgatcaattaatttcttttggggCTGATCAcgttatattttgttgtttcccATGTTTTCTGAGGAATCGAACAGAGTGGCAATAGTTTACACGCAAAAAGGAAATCACCAGTGGAGGGAAAGATCTCTGTAAGATTAGATCACGGGAAGGATTTGAGCAGTTGGGAGCTTAAGGTAGGCTGCAATATTACCGGAAAATGGATTCTTCACTGGGGAGTTTCCCATGTCGATGATGCTGGAAGCGAATGGGATCAACCTCCTCGTGATATGATACCCCCTGGATCAATTCTCGTAAAGGACTATGCAATAGATACACCCTTGAAGAAATCATCATCTTCTATCGAAGGGGATATTTTCTATGAAGTCAGGATTGATCTTAAACCTGACAGCAAAATTGCGGCGATAAATTTTGTTCTGAAgGATGAGGAAACCGGAGCTTATTATCAACACAAAGGAAGAGATTTCAAGGTGCCGCTGGTGGACTACCTTAAGGAGGAAGCTAATGTAATCAGACCAAAAAGGGACTTTAGCATATGGCCagGGTTTTTGGGGGGATTATCTAACATACTCTTCAAATCAGAAGCAACAGAGAATGAAGGTCAAGACAAAAGCAGTCAGTCCAAAGattttaaacaagaaaataacaaactaAAAGGTTTTTATGTAGAATTACCTATTACAAAAGAGGTTCCAGTCAATAACTCTGTCAGTGTCTCCATTCGTAAGTGTTCTGAGACTTCCAAgaatcttttatatttggaaACGGATCTATGTGGAGATATTGTCCTTCACTGGGGAGTTTGCAGAGGTAATTCAAGGAGATGGGAAATACCACCAGGTCCTCATCCGCCAGAAACAGTGGCATTCAAAGATAGGGCCTTGAGAACTCGATTACAGCCAAGAGAAAGTGGGAAAGGATGTTCAGTATTAATCACtttggaagaagaattttcaggatttctttttgttctcaaAGTAGAAAACTCTTGGTTAGATTACAAAGGGAATGATTTCTATATCCCACTTCCAAATTCTAGTAGCTTACATACTGAAACCAAAGATCATCAGTTAAAAGGTGTGCAAAGTATGGGGACTGAAAAGGCAAGTGAAGAGTCTTCTTTATCTCAATTTACTGATGGAATAATCAATGAAATAAGGAGCTTCGTTTCAGACATTTCCTCACAGAAGATTCAAAGGACAAAAACCAAAGAAGCACGAGAAAGCATTcttcaagaaattgaaaaactaGCTGCTGAAGCCTATAGTATTTTCAGAAGCTCTGTTTCATCTTTCTCAGAGGAAGCTATTATGGAACCTGAGGTTGTAGAATCTGAGACACCGAAGTCAACTCCAAAAATAAGTTCTGGGACAGGTACAGGGTTTGAAATATTATGTCAAGGGTTCAACTGGGAATCACATAAATCTGGAAGATGGTACATGGAGCTGAAAGAGAAAGCTTCAGAACTAGCATCACTTGGTTTCACTGTGATTTGGTTACCACCACCTACTGAGTCCGTTTCACCTGAAGGATACATGCCAAAGGATTTATATAATCTAAATTCGAGATATGGGAATATTGGTCAACTGAAGGACGTAGTGAAATCATTTCATGAAGTGGGGATCAGAGTTCTTGGAGATGTCGTTTTAAATCATCGTTGTGCTCACTTTCGGAATCAGAATGGTGTTTGGAACATATTTGGTGGTCGTCTAAAGTGGGATGACTGTGCTGTTGTTGCTGATGATCCACATTTTCagGGTAGGGGCAACAAGAGTAGTGGGGATAATTTCCATGCTGCTCCAAACATTGATCATTCACAGGAATTTGTGAGGAGAGATCTCAAAGAATGGTTATGTTGGTTGAGGGAAGAAATTGGGTATGATGGATGGAGGCTTGACTTTGTGAGAGGATTTTGGGGTGGTTATGTCAAGGACTACCTGGATGCAAGTGAACCTTATTTTGCTGTGGGAGAGTACTGGGATTCCCTCAGTTATACATATGATGGGATGGATCACGACCAAGATGCTCATAGGCAGAGGATCATAGATTGGGTTAATGCAACTAATGGTACTGCCGGTGCTTTTGATGTCACAACGAAAGGGATTCTTCACTCTGCATTGGAAAGATGTGAATACTGGCGATTATCAGATCAAAAGGGAAATCCCCCAGGTGTCGTTGGATGGTGGCCTTCTCGTGCTGTTACCTTCATAGAAAATCATGACACTGGTTCTACCCAGGGTCACTGGAGATTTCCCAGCGGAAAAGAAATGCAAGGATATGCTTACATCCTTACTCACCCAGGAACACCAACGGTGTTCTATGACCACCTTTTCTCTCATTATCAATCCGAAATCGCAGCGCTTATCTCTCTGAGAAAACGGAAGAAGATCCACTGCAGGAGTGAAGTTAAAATCAAGAAGGCCGAGAGGGATGTCTATGCAGCCATCATTGATGAAAAAGTTGCCATGAAGATTGGACCTGGTCATTTTGAACCCCCAAGTGGACTCCAAAATTGGTCCTTAACTATTGAGGGAAGAGACTATAAGATTTGGGAGGCATCCTA 3086 0.3947 MSTVNLEPLFHRCRREIPVYRPKSKALNFKPCFVNCCSFKLFVPDVRSFCNFRPPHIHRSPTVAAASTDTATLDSFQSTGDVLFRETYPANQTEMSGNSLHAKRKSPVEGKISVRLDHGKDLSSWELKVGCNITGKWILHWGVSHVDDAGSEWDQPPRDMIPPGSILVKDYAIDTPLKKSSSSIEGDIFYEVRIDLKPDSKIAAINFVLKDEETGAYYQHKGRDFKVPLVDYLKEEANVIRPKRDFSIWPGFLGGLSNILFKSEATENEGQDKSSQSKDFKQENNKLKGFYVELPITKEVPVNNSVSVSIRKCSETSKNLLYLETDLCGDIVLHWGVCRGNSRRWEIPPGPHPPETVAFKDRALRTRLQPRESGKGCSVLITLEEEFSGFLFVLKVENSWLDYKGNDFYIPLPNSSSLHTETKDHQLKGVQSMGTEKASEESSLSQFTDGIINEIRSFVSDISSQKIQRTKTKEARESILQEIEKLAAEAYSIFRSSVSSFSEEAIMEPEVVESETPKSTPKISSGTGTGFEILCQGFNWESHKSGRWYMELKEKASELASLGFTVIWLPPPTESVSPEGYMPKDLYNLNSRYGNIGQLKDVVKSFHEVGIRVLGDVVLNHRCAHFRNQNGVWNIFGGRLKWDDCAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRRDLKEWLCWLREEIGYDGWRLDFVRGFWGGYVKDYLDASEPYFAVGEYWDSLSYTYDGMDHDQDAHRQRIIDWVNATNGTAGAFDVTTKGILHSALERCEYWRLSDQKGNPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMQGYAYILTHPGTPTVFYDHLFSHYQSEIAALISLRKRKKIHCRSEVKIKKAERDVYAAIIDEKVAMKIGPGHFEPPSGLQNWSLTIEGRDYKIWEAS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01035 923 SMART aamy 532 861 IPR006047 GO:0005975
Bva11g01035 923 Gene3D - 866 922 IPR013780 -
Bva11g01035 923 Coils Coil 469 489 - -
Bva11g01035 923 Gene3D Glycosidases 532 865 - -
Bva11g01035 923 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 97 923 - -
Bva11g01035 923 SUPERFAMILY (Trans)glycosidases 533 851 IPR017853 -
Bva11g01035 923 Pfam Alpha-amylase C-terminal beta-sheet domain 863 921 IPR012850 GO:0004556|GO:0005509|GO:0005975
Bva11g01035 923 CDD AmyAc_arch_bac_plant_AmyA 533 872 - -
Bva11g01035 923 SUPERFAMILY Glycosyl hydrolase domain 866 921 - -
Bva11g01035 923 Pfam Alpha amylase, catalytic domain 559 843 IPR006047 GO:0005975
Bva11g01035 923 PRINTS Alpha-amylase signature 800 812 IPR006046 GO:0004556|GO:0005975|GO:0043169
Bva11g01035 923 PRINTS Alpha-amylase signature 610 621 IPR006046 GO:0004556|GO:0005975|GO:0043169
Bva11g01035 923 PRINTS Alpha-amylase signature 696 707 IPR006046 GO:0004556|GO:0005975|GO:0043169
Bva11g01035 923 SMART alpha-amyl_c2 862 922 IPR012850 GO:0004556|GO:0005509|GO:0005975
Bva11g01035 923 PANTHER ALPHA-AMYLASE 97 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01035 Bva-Chr11 11933580 11941303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01035 1 923 Glycoside Hydrolase AT1G69830 64.769 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01035 K01176 - gmx:100788193 1387.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01035 11 11933580 11941303 Bva11g01035 11 11933580 11941303 ECH