Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01027 ATGGCGCAAGCACAGGAGGTCAGAGCAAGCCACAAACTTTTGAGCTGTGATAGCTATTTTGAGACCATGCAGTCCAGAAAGAAAATACCACAGGCATTGCAAGAGAGATTAACAGATGCATTTGCAAAGATTCCTGTATCTTCTTTTCCAGGAGTTCCCAGAGGACAAGTTGTTGAAATTCCAGCAGACACATCTATTGGTGATGCAGTTAAGATTCTCTCTGAATGTAATATATTAGCTGCCCCCGTTAGAGACCCAGATGCAGCAACTAGTTCAAATTGGAGAGACAGGTACCTTGGTATCATAGATTATTCATCTATCATTCTCTGGGTGCTGGAAAGTGCAGAACTTGCTGCAGTTGCACTATCAGCAAGTACAGCAACGGCTGCTGGACTTGGCGCAGGAACAGCTGGTGCTCTTGGAGCGCTTGCAGTGGGAATGACAGGTCCGGTTGCAGTTGCTGGTCTAACAGCTGCTGCAGTAGGTGCTGCAGTGGCAGGCGGTGTTGCTGCAGATAAGGGGATGGGCAAGGATGCTGCTTCAGCTGCTGACAAACTGGGGGATGACTTCTACAAAGTTATACTGCAAGAAGAACCCTTCAAATCAACAACAGTGCGATCAATAGTGAAATCATATCGTTGGGCTCCTTTCATTCCAGTTGCAACAGGTAGCGCTATGTTAACAGTCTTGCTGCTTCTCTCAAAATATAGGCTGAGAAACGTACCCATCATCGAACCGGGGAAGCCTGACATTAAGAATTTCATTACTCAATCTGCAATAATTCATGGTCTTGAGGGATGCAAAGGAAGAGACTGGTTTGATCTAATTGCTGCAAGTCCTATATCCGACCTGGGACTCCCCTTTATGTCAACTGATGAGATTGTTAGCATCCAGAACAATGAATTGATCCTTGAAGCTTTCAAGAGAATGAAAGATAATCATATTGGTGGTCTTCCTGTAGTAgagggaccaaggaagagaattGTTGGGAGCTTAAGCATAAGAGATGTCAGATACTTGCTGCTAAGGCCTGAACTTTTCTCCAATTTCAGGAAGCTGACTGTGGCGGATTTCATGACTACAATTGTGGAAGCAACCAGAGAAACTGGAAGAATTACTCACCCCATAACATGCAAGCCTGACTCGACTCTGGGAGATGTGATTCACACTCTTGCTTCTCATTCTATCCACAGGATTTACGCAGTTAATGAGAATGATGATGTCATGGGGGTCATTACACTGAGAGATGTGATCACTTGTTTCATCACTGAGCCTTCTTACCACTTTGACGATTATTTTGGCTTTGCTGTGAGAGAGATGCTGGGTCACTG 1331 0.441 MAQAQEVRASHKLLSCDSYFETMQSRKKIPQALQERLTDAFAKIPVSSFPGVPRGQVVEIPADTSIGDAVKILSECNILAAPVRDPDAATSSNWRDRYLGIIDYSSIILWVLESAELAAVALSASTATAAGLGAGTAGALGALAVGMTGPVAVAGLTAAAVGAAVAGGVAADKGMGKDAASAADKLGDDFYKVILQEEPFKSTTVRSIVKSYRWAPFIPVATGSAMLTVLLLLSKYRLRNVPIIEPGKPDIKNFITQSAIIHGLEGCKGRDWFDLIAASPISDLGLPFMSTDEIVSIQNNELILEAFKRMKDNHIGGLPVVEGPRKRIVGSLSIRDVRYLLLRPELFSNFRKLTVADFMTTIVEATRETGRITHPITCKPDSTLGDVIHTLASHSIHRIYAVNENDDVMGVITLRDVITCFITEPSYHFDDYFGFAVREMLGH 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01027 443 Pfam CBS domain 289 341 IPR000644 -
Bva11g01027 443 Pfam CBS domain 355 418 IPR000644 -
Bva11g01027 443 SMART cbs_1 56 112 IPR000644 -
Bva11g01027 443 SMART cbs_1 374 422 IPR000644 -
Bva11g01027 443 SMART cbs_1 216 265 IPR000644 -
Bva11g01027 443 SMART cbs_1 293 342 IPR000644 -
Bva11g01027 443 SUPERFAMILY CBS-domain pair 288 430 IPR046342 -
Bva11g01027 443 ProSiteProfiles CBS domain profile. 52 117 IPR000644 -
Bva11g01027 443 ProSiteProfiles CBS domain profile. 289 348 IPR000644 -
Bva11g01027 443 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 11 441 - -
Bva11g01027 443 Gene3D - 276 424 IPR046342 -
Bva11g01027 443 ProSiteProfiles CBS domain profile. 371 431 IPR000644 -
Bva11g01027 443 PANTHER BNAANNG38820D PROTEIN 11 441 - -
Bva11g01027 443 CDD CBS_pair_SF 291 418 - -
Bva11g01027 443 CDD CBS_pair_SF 56 113 - -
Bva11g01027 443 Gene3D - 52 268 IPR046342 -
Bva11g01027 443 SUPERFAMILY CBS-domain pair 38 263 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01027 Bva-Chr11 11897445 11899855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01027 - - gmx:100800376 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01027 11 11897445 11899855 Bva11g01027 11 11897445 11899855 ECH