Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00998 ATGGGAACTGGGCTGACGAGGTGCTCTCACAGCAGCGCCATATTCAGAGCTTTCAAACCTTGCAATCCAAAGCTTACTAATTCACTTCGACCCTCGTCAATGCCTATCCACAACGGTGGATCAAGTTCTTGTGGGAGAGCTTATGATGCATTGCTGTTGGACGCTGGAGGTACCCTTTTGCAGTTGACTAAACCAGTTGAAGAGGTTTACGCCACTATTGGGAGCAAGTATGGTTTAACTTCAACACCAGCCGATATAAAGCAGGGATTTAAAAGAGCTTTTGCTGCTCCTCACTGGCCTGAAAAGCTACGTTACCAAGGAGATGGGAGGCCATTTTGGAAACTTGTAGTTTCCGAAGCCACTGGTTGtgcaaatgaaaattattttgaggaAGTTTATGAGTACTATGCAAAAGGTGATGCGTGGCATCTTCCAGATGGAGCTTCTGAAACAATTTCTGTTCTCAAGGATGCTGGAgTTAAAATGGCTGTTCTATCCAATTTCGACAACCGCTTAAGGAAACTATTGAAGGatcttaatgttttaaatctGTTTGATGCAGTCATTATTTCCTCAGAGGTTGGATATGAGAAACCAGACCCGAAAATATTTCAAGCTGCTTTAGATCAACTTAATGTAGAGGCTAGCAAAGCATTACACATTGGAGATGATCAAAAGGCAGATAAAGCGGGTGCCAATGCAGTTGGGATAGATTGCTGGTTATGGGGTGTTGATGTGAAGACATTTACTGATATACGAAACCGCATCCTCAATTTGGGGTCATA 785 0.4153 MGTGLTRCSHSSAIFRAFKPCNPKLTNSLRPSSMPIHNGGSSSCGRAYDALLLDAGGTLLQLTKPVEEVYATIGSKYGLTSTPADIKQGFKRAFAAPHWPEKLRYQGDGRPFWKLVVSEATGCANENYFEEVYEYYAKGDAWHLPDGASETISVLKDAGVKMAVLSNFDNRLRKLLKDLNVLNLFDAVIISSEVGYEKPDPKIFQAALDQLNVEASKALHIGDDQKADKAGANAVGIDCWLWGVDVKTFTDIRNRILNLGS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00998 261 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 51 241 IPR011949 -
Bva11g00998 261 SFLD Haloacid Dehalogenase 48 241 - -
Bva11g00998 261 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 153 236 IPR006439 -
Bva11g00998 261 Gene3D - 52 242 IPR023214 -
Bva11g00998 261 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 48 241 - -
Bva11g00998 261 SUPERFAMILY HAD-like 48 243 IPR036412 -
Bva11g00998 261 CDD HAD_dREG-2_like 148 259 - -
Bva11g00998 261 Pfam Haloacid dehalogenase-like hydrolase 123 239 IPR041492 -
Bva11g00998 261 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 155 168 IPR006439 -
Bva11g00998 261 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 203 223 IPR006439 -
Bva11g00998 261 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 185 201 IPR006439 -
Bva11g00998 261 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 48 59 IPR006439 -
Bva11g00998 261 PANTHER - 2 258 - -
Bva11g00998 261 Gene3D - 64 137 IPR044924 -
Bva11g00998 261 PANTHER F14L17.7 PROTEIN 2 258 - -
Bva11g00998 261 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 162 239 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00998 Bva-Chr11 11719576 11723311 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00998 - - qsu:112001506 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00998 11 11719576 11723311 Bva11g00998 11 11719576 11723311 ECH