Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00965 ATGCAGGAATCGACCTCGTCTTTCTGTAATCTAGGGGTTCTGGATGCTCTTACAGATGATTCAATACAGGAAATCCTCGAAAGCTACAATGGCTTCTGTGTTACCACGCAGACTCTTCTGGGGGGTGCTGGAGACCTCTCTGCTGGTACGGAGTTCGTAGCTCACGTTCATAGCCTCTGCAAACATGGCCTAGAGTCTCTGGTTCGAGATCACTTTCTTCGAGTACTAGAgGAAGcatttgaaagaaatggtGCATCGAAATTTTGGCGACATTTTGACGCTTACAGTAATTTTGCTGATTTAAAGAGGAATGACGATGTCGATATTAATGAGGATGAGATTCAGCAAGTGCTGTGTAACGCTTTGGAAGAAATATCTTTGGAGAAGCAGTATCAGGAGAAGTGTTTGTTGATATTGGTCCATGCTTTACAATCTTACAAGGATCAGATGTCAGGGGAAAGACATAATTTTCAAGCAGAAAGAGATTATCTTGTCTCTAAATATCAATTACTTGTCTCGTCTGTACTAATGGCTACGCTTCCTCGGCATTTTCCTGTGATACTGCACTGGTATTTTAAGACAAGATTGGAGGAGTTAAGTACAATTATGGGTGAAGATTTCGATGATGATGCATCTCTAAATAAGGATGACATGGATTTagatgaaaaaggaaaggtCTTTAACAAGGTTGGTGAGATGGATGTTGATGAATATTATAGCCACAGTAGGTTCTCTGAAAACAGTAGATTGGTGAAGAACATTGGTAAGGTTGTACTTGATCTTAGAAGCCTTGGATTTACATCTATGGCTGAAGATGCTTATGCTTCTGCTATCTTCTTGCTTCTAAAGGCTAAAGTACATAATCTAGCTGGCGATGATTTTAGGAGCTCTGTTTTACAATCAATTAAAAGCTGGATACAGGCTGTACCTCTTCAGTTTCTGCATGCCCTTCTTGTCTATCTTGGTAACTCTGTCAGTTATGAGAGTACTTCATCAGGTCTCAAATCACCTTTGGCTCCACAATCATCTGTGTGCTGTCCTGGGATTGATACTCCCTCTGAAGGGCTTATTAGATGGAAGTTGCGGCTGGAATATTTTGCTTATGAAACATTGCAAGATTTAAGAATTGCTAAACTATTTGAGATAATTGTTGATTATCCTGAAAGCTCTCCTGCAATTAAGGACTTAAAATTATGCCTTGAATACACTGGACAACATTCCAAGCTGGTGGAGTCATTTATTTCAGCACTACGCTATCGCTTGCTCACTGCAGGTGCATCAACCAATGATATATTGCACCAATATGTTTCAACCATAAAAGCCTTAAGGACAATAGACCCTGCTGGTGTTTTCCTTGAGGCAGTTGGTGAACCAATAAGGGACTATTTGAGAGGAAGGAAGGATACCATAAAGTGCATAGTAACCATGCTTACTGATGGGACTAGTGGAAGTTCAAGCGCATCTGGAAATCCAGGAGATAGCCTTCTTGAAGAGTTGAACAGAGATGAAGAAATTCGAGAAAATGATGGTGTTGATGATGATTTCAACACTGATGATAGGCAAGCATGGATCAATGCCTCATGTTGGCAGCCTGACCCTGTGGAAGCAGATTCTTTGAAAGGTAGCAGGAACCGGAGGAAGGTGGACATACTTGGGATGATTGTAGGCATAATTGGTTCCAAAGATCAATTGGTTAATGAATATCGAACTATGCTAGCGGAAAAACTTCTAAACAAATCTGATTATGATATAGACGCAGAGATCCGTACTGTGGAACTCCTTAAGATACATTTTGGGGAGAGCAGTCTACAGAAATGTGAGATTATGCTCAACGATCTAATTGACTCAAAGAGGACCAATAGCAATATTAAAGCTACCATAAAGCCACCATCTCAAACAAGTGCTGACACAGGAGACAATGCAATATCCATGGACTTAATTTCTGCCACTATCTTATCTTCTAATTTCTGGCCCCCAATACAGGATGAGCCGCTCAACCTGCCTGGACCAGTTGACCAGCTCCTCTGCGACTATGCCAAGAGATTTAGTGAAATCAAAACCCCCCGTAAGCTACAATGGAAGAAAAGTCTTGGGACTGTCAAGCTGGAGTTGCAATTTGAAGATAGGGCAATGCAATTCACTGTAGCTCCTGTTCATGCATCTATCATTATGCAATTTCAAGATCAAATGAGTTGGACCTCTAAAGATCTGGCAGCTGCTATTGGAGTACCTGTAGATGTGCTGAATCGGAGGATAAATTTCTGGATAAGTAAGGGGATCATTGCTGAGTCACACGGGGCAGATTCTGATCATGTGTATACCCTAATGGAAAACATGGTTGACCCAGGTAAGAACGGAGGCAGTAATGGCAGTCCTCAGGAGCTTTTAGGAGGCGATGAGGAGGAAGAGAGATCTGTGGCTTCTGTGGAGGATCAACTTCGTAAGGAAATGACTGTTTATGAGAAATTTATCTTGGGGATGCTCACGAATTTTGGTAGTATGGCATTAGATCGAATTCACAATACGCTCAAGATGTTTTGCATTTCTGATCCTGCTTATGACAAGTCACTCCAACAACTACAAAGTTTTTTGTCTGGTCTAGTTTCTGAGGAGAAGTTAGAACATAGAGAtggaatgtattttttaaagaaata 2654 0.4047 MQESTSSFCNLGVLDALTDDSIQEILESYNGFCVTTQTLLGGAGDLSAGTEFVAHVHSLCKHGLESLVRDHFLRVLEEAFERNGASKFWRHFDAYSNFADLKRNDDVDINEDEIQQVLCNALEEISLEKQYQEKCLLILVHALQSYKDQMSGERHNFQAERDYLVSKYQLLVSSVLMATLPRHFPVILHWYFKTRLEELSTIMGEDFDDDASLNKDDMDLDEKGKVFNKVGEMDVDEYYSHSRFSENSRLVKNIGKVVLDLRSLGFTSMAEDAYASAIFLLLKAKVHNLAGDDFRSSVLQSIKSWIQAVPLQFLHALLVYLGNSVSYESTSSGLKSPLAPQSSVCCPGIDTPSEGLIRWKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIKDLKLCLEYTGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTDGTSGSSSASGNPGDSLLEELNRDEEIRENDGVDDDFNTDDRQAWINASCWQPDPVEADSLKGSRNRRKVDILGMIVGIIGSKDQLVNEYRTMLAEKLLNKSDYDIDAEIRTVELLKIHFGESSLQKCEIMLNDLIDSKRTNSNIKATIKPPSQTSADTGDNAISMDLISATILSSNFWPPIQDEPLNLPGPVDQLLCDYAKRFSEIKTPRKLQWKKSLGTVKLELQFEDRAMQFTVAPVHASIIMQFQDQMSWTSKDLAAAIGVPVDVLNRRINFWISKGIIAESHGADSDHVYTLMENMVDPGKNGGSNGSPQELLGGDEEEERSVASVEDQLRKEMTVYEKFILGMLTNFGSMALDRIHNTLKMFCISDPAYDKSLQQLQSFLSGLVSEEKLEHRDGMYFLKK 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00965 884 Gene3D - 799 884 IPR036388 -
Bva11g00965 884 SUPERFAMILY "Winged helix" DNA-binding domain 813 883 IPR036390 -
Bva11g00965 884 PANTHER BNAC04G32030D PROTEIN 14 884 - -
Bva11g00965 884 SMART APC2_2 823 882 IPR014786 -
Bva11g00965 884 Pfam Cullin family 551 752 IPR001373 GO:0006511|GO:0031625
Bva11g00965 884 MobiDBLite consensus disorder prediction 778 808 - -
Bva11g00965 884 Gene3D Cullin Repeats 531 629 - -
Bva11g00965 884 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 14 884 IPR044554 -
Bva11g00965 884 Gene3D Cullin; Chain C, Domain 2 644 784 - -
Bva11g00965 884 SMART cul_2 549 706 IPR016158 -
Bva11g00965 884 SUPERFAMILY Cullin homology domain 528 776 IPR036317 -
Bva11g00965 884 Pfam Anaphase promoting complex (APC) subunit 2 823 880 IPR014786 -
Bva11g00965 884 ProSiteProfiles Cullin family profile. 553 756 IPR016158 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00965 K03349 - gmx:100785428 1459.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00965 11 11562888 11570495 Bva11g00965 11 11562888 11570495 ECH