Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00878 ATGTCTCGTAAATTGGACAGCCCTGTTCAAACCCAAATGGCTGTGGCAGTCTTTAGGAATCCGCTTAGTGGGGAGCACCGTGGAAAAAGTATGGAAGGGAAACAACCTGTTGGGAGGCGACGGGTTTTCGTGCAAACTGAAAAGGGTTGTGTATTGGGAATGGAATTGGATAGGAGTGACAATGCTCATACTGTGAAGAGGAGGTTGCAGCTTGCCCTTAATGTCCCAACAGAGGAGAGCTCACTAACTTTCGGTGATATTGTACTGAAGAATGACCTTAGTGCTGTTCGAAATAATTCTCCCCTTCTTCTTATACGGAATCTTATGCACAGAAGCTCATCCACTCCATGTATGTCTCTCATTGGAACGGATATCCTACAAAGGGACAACAGTGGTCCTATTGAGATCTTAGGGCAATCAAATTGCCTTGATAGAATAAAACAACTGGTCAAGGACATTGTGAAGGCAATTAAGAATGGTATTGATCCAATTCCCGTTCACGGTGGGCTTGGAGGTGCTTACTATTTCCGAAATAGCAGAGGTGAGAATGTTGCAATTGTGAAACCAACAGATGAGGAACCTTTTGCCCCAAACAACCCAAAAGGCTTTGTTGGTAAAGCTCTTGGACAACCCGGTTTGAAACGGTCGGTTAGGGTAGGGGAGACAGGATTCAGGGAGGTTGCAGCTTATCTTCTTGACTACAACCATTTCGCAAATGTGCCTCCGACTTCCTTAGTGAAGATTACTCACTCAATTTTCAATGTCAATGATGGGGTCAATGACAATAATTTTCGAAGGAGGAGGCTAGTTAGCAAGATTGCATCTTTCCAACAGTTCATACCTCATGATTTTGATGCCAGTGATCATGGGACCTCTAGCTTCCCAGTTGCTGCTGTCCATCGTATAGGTATATTAGATATCAGGATTCTTAACACTGATAGGCATGCTGGAAATCTGTTAGTTAGGAAACTTGATATCAATGGGGCATTTGGTCAGGTGGAACTCATTCCAATTGATCATGGGCTTTGCCTGCCAGAAACTTTGGAGGACCCATACTTCGAGTGGATTCATTGGCCTCAAGCTTCAATCCCGTTCTCTGAGGATGAGCTTGAATACATTGAAAATCTTGATCCTCTTAGGGACTGTGAGATGCTACGAATGGAATTGCCCATGATTCAAGAGGCTTGTTTGAGAGTCTTAGTACTCTGCACCATTTTCCTCAAGGAGGCTGCTGCTTATGGTCTCTGTCTTGGTGAAATTGGTGAGATGATGACGAGGGAATTTCGCAGAGGTGAGGAGGAGCCCAGTGAACTTGAGGTTGTATGTTTGGAGGCAAGGAAAATGTTAGCAGCTGATAGGGAGGAACTTTCTCCTGGGACTGAGTTGGGAGACGATGAATTCCAGTTTGATATAGATTGTAATGAATTTGCGTCAGAGTTTACTCCAAAGATGGCAGTTGATGATACAATAAGTAGAGCACCTCTTCAGCCTGGATTTGGGTTTGGGTATGGTCGCAGCCCACTTTCTAAACTGGAGGAGAGCATTGAGGAGGAAAGCAATGGAGAAGACCCAGATGAATTTATAACCTTTCCAACTCAAGAAAAAATCCCTACAGTTTCAAATCTTTCAATGTCACTGAAAAACACCATTTTAGGTgagaaaaaacagaaacacCAGAAGTATTCAGGAGAAGGTAAAGTAGAGAAGAGCTATTTTGCGAACACTTCTTCTGGGCACAAGAGTGCCAACGAGCAGCTTCCTGCAAGCATAAGCTTTGTGAAGCTAGCAGATATGAGTGATGATGAATGGACAGTGTTTCTGGGCAAGTTTCTAGAGCTACTGTATCCAGCATTTGCCAAAAGGAAATCCATAACCTTAGGTCAGAAGCAGAGACAGAGGCTTGGTACTTCGTGCCAGTTTTG 1922 0.436 MSRKLDSPVQTQMAVAVFRNPLSGEHRGKSMEGKQPVGRRRVFVQTEKGCVLGMELDRSDNAHTVKRRLQLALNVPTEESSLTFGDIVLKNDLSAVRNNSPLLLIRNLMHRSSSTPCMSLIGTDILQRDNSGPIEILGQSNCLDRIKQLVKDIVKAIKNGIDPIPVHGGLGGAYYFRNSRGENVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGFREVAAYLLDYNHFANVPPTSLVKITHSIFNVNDGVNDNNFRRRRLVSKIASFQQFIPHDFDASDHGTSSFPVAAVHRIGILDIRILNTDRHAGNLLVRKLDINGAFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASIPFSEDELEYIENLDPLRDCEMLRMELPMIQEACLRVLVLCTIFLKEAAAYGLCLGEIGEMMTREFRRGEEEPSELEVVCLEARKMLAADREELSPGTELGDDEFQFDIDCNEFASEFTPKMAVDDTISRAPLQPGFGFGYGRSPLSKLEESIEEESNGEDPDEFITFPTQEKIPTVSNLSMSLKNTILGEKKQKHQKYSGEGKVEKSYFANTSSGHKSANEQLPASISFVKLADMSDDEWTVFLGKFLELLYPAFAKRKSITLGQKQRQRLGTSCQF 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00878 640 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE 5 640 - -
Bva11g00878 640 CDD Ubl_ubiquitin_like 42 105 - -
Bva11g00878 640 SUPERFAMILY Ubiquitin-like 39 112 IPR029071 -
Bva11g00878 640 Pfam Phosphatidylinositol 3- and 4-kinase 170 417 IPR000403 -
Bva11g00878 640 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 160 457 IPR000403 -
Bva11g00878 640 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 5 640 IPR044571 -
Bva11g00878 640 MobiDBLite consensus disorder prediction 18 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00878 Bva-Chr11 11127522 11131056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00878 1 640 Acyl Lipid Metabolism Gene Families AT1G26270 70.279 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00878 - - aip:107643746 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00878 11 11127522 11131056 Bva11g00878 11 11127522 11131056 ECH