Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00852 ATGGCCGCCTTGTCAGTTTCTGCAATTGGTTTTGAAGGTTACGAGAAGAGGCTGGAAATATCCTTTTTCCACCCTGGACTATTCCTTGACCCTGAAGGAAAGGGTCTAAGAAGTCTGACAAAATCCCAGTTGGACGAGATTTTAACACCAGCAGAGTGTACCATAGTTTCATCACTGTCTAATGATGAGGTCGACTCCTATGTTCTCTCTGAGTCCagcctttttgtttttccgtACAAGATCATCATAAAAACCTGTGGTACTACCAAGTTGCTACTTTCAATCCCACCCATATTGAAGATGGCTGAGCTGCTTTCCCTCACTGTTCGATCTGTGAGGTACACCCGTGgaagtttcatttttcctGGAGCTCAGCACTATCCACACCGTAACTTCTCTGAGGAAGTATCTGTCCTTGATAGCTATTTTGGGAAGCTTGGATTAGGCAGCAAGGCTTATGTAATGGGTGGATCAGGAAAACCACAGAAATGGCATGTGTACTCTGCTTTCGCAAATTCAGTGAGCTCATGTGACTCTGTTTACACGCTGGAGATGTGCATGACTGGTTTGGATAGAGAGAAGTCATTGGTTTTCTACAAAGAACAATCTGGCTCAGCAGCTCTGATGACTGTCAACTCTGGTATTAGAAAGATTCTCCCTGATTCTCAGATATGCGACTTTGATTTTGAACCTTGCGGATATTCAATGAATTCTGTGGAAGGAGCTGCAGTTTCTACCATTCACGTCACACCAGAAGATGGTTTCAGTTATGCCAGCTTTGAAACAGTGGGCTATGATTTGAAAGCAGTGAACCTGAACCGAATAGTTGAGAGGGTGTTGGCATGCTTCGAACCAAAAGAGTTTTCAATTGCTGTGCATGCAGATGTTTCAGGTAAGTCATTTGAGCAGGACTGTTTGCTGGATGTTAAGGAATACCGCCGCGAAGAGAGGAGCCACGAGGAGCTTGGAATGGGTGCTTCTATTATCTACCAAAAGTTCATGAGGACTTGTGAATGTGGTTCACCTAGATCAACTCTGAAATGCTGGAAAGacgaagatgaagaagagta 1070 0.4224 MAALSVSAIGFEGYEKRLEISFFHPGLFLDPEGKGLRSLTKSQLDEILTPAECTIVSSLSNDEVDSYVLSESSLFVFPYKIIIKTCGTTKLLLSIPPILKMAELLSLTVRSVRYTRGSFIFPGAQHYPHRNFSEEVSVLDSYFGKLGLGSKAYVMGGSGKPQKWHVYSAFANSVSSCDSVYTLEMCMTGLDREKSLVFYKEQSGSAALMTVNSGIRKILPDSQICDFDFEPCGYSMNSVEGAAVSTIHVTPEDGFSYASFETVGYDLKAVNLNRIVERVLACFEPKEFSIAVHADVSGKSFEQDCLLDVKEYRREERSHEELGMGASIIYQKFMRTCECGSPRSTLKCWKDEDEEE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00852 356 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE 3 356 IPR001985 GO:0004014|GO:0006597|GO:0008295
Bva11g00852 356 Pfam Adenosylmethionine decarboxylase 10 333 IPR001985 GO:0004014|GO:0006597|GO:0008295
Bva11g00852 356 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 2 3 356 - -
Bva11g00852 356 SUPERFAMILY S-adenosylmethionine decarboxylase 14 335 IPR016067 GO:0004014|GO:0008295
Bva11g00852 356 ProSitePatterns S-adenosylmethionine decarboxylase signature. 66 76 IPR018166 GO:0004014
Bva11g00852 356 Gene3D - 1 71 - -
Bva11g00852 356 Gene3D - 72 336 - -
Bva11g00852 356 PIRSF SAM_decarbox_euk 2 339 IPR001985 GO:0004014|GO:0006597|GO:0008295
Bva11g00852 356 TIGRFAM SAM_DCase: S-adenosylmethionine decarboxylase proenzyme 11 336 IPR001985 GO:0004014|GO:0006597|GO:0008295
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00852 Bva-Chr11 10995696 10998335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00852 K01611 - gmx:121172625 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00852 11 10995696 10998335 Bva11g00852 11 10995696 10998335 ECH