Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00782 ATGGCCCCCAAATCGGATAGCACCGAAGCGATCGTGTTGAACTTTGTGAATGAGCAAAATAGGCCATTAAATTCGCAAAATGTGGCTGATGCATTGCAAAAGTTCAACCTCAAGAAGGCAGCAATACAGAAGGCACTGGATAATCTTGCTGATAATGGGCGTATTTCATTCAAGGAGTATGGTAAGCAGAAGATATATGTTGCCCGGCAAGATCAATTCGATATTCCAAACAACGAAGAGCTTAATCAGACGAAGGAACAAAATTCCAAGCTGCAACAACAACTGGAAGAACAGAAGAAGGCCATTAGCGAGGTTGAAGGAGAAATTAAAGCATTGCAGTCAAATTTGACACTGGAACAGATACACGAAAGAGAAGCCAAACTGAGAATTGAGGTTGAAGAAATGGAGAACAAATTGGCTAAGTTACGCGGAGGTGTTACTCTGGTGAGGCCAGAAGAACGAAAGATAGTTGAGGAAATGTACTCGGAAAAATTAAGTCAGTGGAAAAGGCGTAAAAGGATGTTCAAAGACATATGGGATGCCATTACTGAGAACTCACCTAAGGATCCCAAAGAATTCAAGGAGGAACTAGGGATAGAATATGATGAAGACATTGGTGTGAGCTTGTCGTTGTTTAGTGACCTGCTGCAACATGACAAGAAGCGGCGTAGGGGAGAATG 680 0.4235 MAPKSDSTEAIVLNFVNEQNRPLNSQNVADALQKFNLKKAAIQKALDNLADNGRISFKEYGKQKIYVARQDQFDIPNNEELNQTKEQNSKLQQQLEEQKKAISEVEGEIKALQSNLTLEQIHEREAKLRIEVEEMENKLAKLRGGVTLVRPEERKIVEEMYSEKLSQWKRRKRMFKDIWDAITENSPKDPKEFKEELGIEYDEDIGVSLSLFSDLLQHDKKRRRGE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00782 226 PANTHER TBP-1 INTERACTING PROTEIN 1 221 IPR040461 GO:0007131
Bva11g00782 226 Coils Coil 77 115 - -
Bva11g00782 226 Coils Coil 118 145 - -
Bva11g00782 226 Coils Coil 32 52 - -
Bva11g00782 226 Gene3D - 2 79 IPR036388 -
Bva11g00782 226 Pfam TBPIP/Hop2 winged helix domain 8 68 IPR010776 -
Bva11g00782 226 SUPERFAMILY "Winged helix" DNA-binding domain 6 74 IPR036390 -
Bva11g00782 226 Pfam Leucine zipper with capping helix domain 149 206 IPR040661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00782 Bva-Chr11 10594894 10596557 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00782 K06695 - qsu:112020063 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00782 11 10594894 10596557 Bva11g00782 11 10594894 10596557 ECH