Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00558 ATGGTTTGCTTGGTTTCTCGCACAGGAAGACAACTTCAGAGGTACAACAACATGGGTGGCCGTCAAGTTGTCGGGTGCATACCTTATAGATACAAGGAAGACATCTATGGCAACTTAAGCAATGAATTGGAAGTTCTTCTGATTAGTTCTCAAAAGGGTCAAAATTTCATGTTCCCaaagGGAGGCTGGGAACTTGATGAATCTGTGGAAGAAGCAGCTTGTAGGGAATCCCTTGAAGAAGCAGGAGTCATTGGAATAGTTGAGTGTGAATTGGGGCAATGGAGCTTCATAAGCAAAAGATATGGCACATACTATGAAGGGCACATGTTCCCTTTGTTTGTCAAGGAGCAACTTGATCTATGGCCTGAGAAAAATGTCAGAAGAAGAATCTGGATGAATGTTGCTGAAGCCAGAGAAGTTTGTCAGCATTGGTGGATGAAGGAAGCCTTAGATATATTGGTTAAAAGGCTGATATCTACTGAACAACAAAAGGAAGATATAGCCATGAATGATTCTTTAAGCTTGCAATG 530 0.4132 MVCLVSRTGRQLQRYNNMGGRQVVGCIPYRYKEDIYGNLSNELEVLLISSQKGQNFMFPKGGWELDESVEEAACRESLEEAGVIGIVECELGQWSFISKRYGTYYEGHMFPLFVKEQLDLWPEKNVRRRIWMNVAEAREVCQHWWMKEALDILVKRLISTEQQKEDIAMNDSLSLQ 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00558 176 CDD Nudix_Hydrolase_9 22 147 - -
Bva11g00558 176 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 160 - -
Bva11g00558 176 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 156 - -
Bva11g00558 176 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Bva11g00558 176 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
Bva11g00558 176 Pfam NUDIX domain 42 140 IPR000086 -
Bva11g00558 176 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 1 160 - -
Bva11g00558 176 SUPERFAMILY Nudix 11 156 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00558 Bva-Chr11 9067680 9069257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00558 K07766 - gmx:100800108 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00558 11 9067680 9069257 Bva11g00558 11 9067680 9069257 ECH