LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva11g00506	ATGGCCGCTTCATCACTCTTTCAAGCCTCCCTCGTTCAACCCAACTCTTCAATATCTCGGAGAGCTCAGCAGTTTCCTTGCCAAGCGCGTAGTCTCCGATATCAATCTCCAAGCTCAaATGTACGTTTTCTGACCAAAAGGGAAAATGGGTTCGTGCCAAAAGCTGCAGCCTTGGAATCGAATGTGAAATCCTATCCAGTTGCAGCAAAAAACGCCAGCAACCCGATCATCGTTATTGACAACTACGACAGCTTTACCTATAACCTTTGCCAGTATATGGGAGAGTTGGGATTTCACTTTGAGGTCTATCGGAATGATGAGTTGACCGTGGAGGAGTTAAAAAGGAAAAATCCTAGAGGGGTGCTAATATCACCTGGGCCAGGCACGCCCCAAGATTCTGGCATATCTTTGCAAACTGTTCTGGAACTTGGGCCAACTGTGCCTCTATTTGGTGTGTGCATGGGTTTGCAGTGCATCGGGGAGGCTTTCGGGGGGAAGATTGTGCGTTCTCCTTATGGTGTCATGCATGGAAAAAGTTCTCTGGTGTATTATGATGAGAAGGGAGAAGACGGATTATTTTCTGGACTATCAAATCCTTTCACTGCTGGTAGATATCACAGCCTTGTCATTGAAAAGGAGAGTTTTCCTCAGGAAGAACTCGAGGTAACGGCCTGGACAGAGGATGGACTTATAATGGCTGCCCGCCACAGGAGATATCGGCATCTACAAGGGGTTCAGTTCCATCCAGAGAGCATTATAACCACCGAAGGGAAGACGATTGTTCGCAACTTTGTCAAGCTGATAGAGAAGGAGGAGGCTGGTGGTGCATGGAATAGCATTGCTGGAGAGATTTA	854	0.4719	MAASSLFQASLVQPNSSISRRAQQFPCQARSLRYQSPSSNVRFLTKRENGFVPKAAALESNVKSYPVAAKNASNPIIVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPYGVMHGKSSLVYYDEKGEDGLFSGLSNPFTAGRYHSLVIEKESFPQEELEVTAWTEDGLIMAARHRRYRHLQGVQFHPESIITTEGKTIVRNFVKLIEKEEAGGAWNSIAGEI	284

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva11g00506	284	PANTHER	MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED	1	273	-	-
	Bva11g00506	284	Gene3D	-	74	267	IPR029062	-
	Bva11g00506	284	TIGRFAM	trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase	76	266	IPR006221	-
	Bva11g00506	284	PRINTS	Glutamine amidotransferase superfamily signature	244	257	-	-
	Bva11g00506	284	PRINTS	Glutamine amidotransferase superfamily signature	148	159	-	-
	Bva11g00506	284	PRINTS	Glutamine amidotransferase superfamily signature	121	130	-	-
	Bva11g00506	284	PANTHER	ANTHRANILATE SYNTHASE BETA SUBUNIT 1, CHLOROPLASTIC	1	273	-	-
	Bva11g00506	284	SUPERFAMILY	Class I glutamine amidotransferase-like	76	270	IPR029062	-
	Bva11g00506	284	CDD	GATase1_Anthranilate_Synthase	76	265	IPR006221	-
	Bva11g00506	284	Pfam	Glutamine amidotransferase class-I	78	265	IPR017926	-
	Bva11g00506	284	PRINTS	Carbamoyl-phosphate synthase protein GATase domain signature	118	132	-	-
	Bva11g00506	284	PRINTS	Carbamoyl-phosphate synthase protein GATase domain signature	148	164	-	-
	Bva11g00506	284	PRINTS	Anthranilate synthase component II signature	244	257	-	-
	Bva11g00506	284	PRINTS	Anthranilate synthase component II signature	76	90	-	-
	Bva11g00506	284	PRINTS	Anthranilate synthase component II signature	174	182	-	-
	Bva11g00506	284	PRINTS	Anthranilate synthase component II signature	121	130	-	-
	Bva11g00506	284	PRINTS	Anthranilate synthase component II signature	197	209	-	-
	Bva11g00506	284	PRINTS	Anthranilate synthase component II signature	148	159	-	-
	Bva11g00506	284	ProSiteProfiles	Glutamine amidotransferase type 1 domain profile.	75	274	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva11g00506	Bva-Chr11	8646303	8651097	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva11g00506	K01658		-	tcc:18610003	419.083

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva11g00506	11	8646303	8651097	Bva11g00506	11	8646303	8651097	ECH