Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00401 ATGGGTGGCAAGGGCGGTAGTGGAGGTGGTGGTGGAAGTGGTAGCAGAGGCAGTGGAGGTGGCGGTGGCGGCGGTGGTGGCTACATGAAAGCGCCCGGTGGCGGTGGTGCTTACGTCTCAAGGGATGCATTTGAGAGTGACCCAAAAGCTTACTTCATGATCATTTGTCCATGGAATCCTGAAAATGCATCAAAAAGAGCCGATTCTGCAACATATCGGTTGGATGTTATGTTTGGGTTGATTGGCAAAGTTACAGTAGTAACTGGTGGTGCTAGAGGGATAGGAGCTGCCACAGCAAAATTATTTGCCAAAAATGGTGCACACGTAGTAATTGCTGATATCCTTGACGATCTCGGCGCCGATTTAGCTGAATCCATAGGTGGCAGGTACATACACTGTGATGTGTCTAAGGAACAAGACGTTGAATCAGCAATTGAGCTTGCACTGTCATGGAAAGGCCACCTAGACATCATGTTCAGCAATGCTGGAATCTCAGGCATTGAGGGAAGCATCACAACCATTGACATGGAGCAAGTGAAACGCTTGCTATCCATCAACCTCCATGGCACCATCCATGGAATCAAACATGCAGCACGAGCAATGATTGAATCAAAAAATGGCGGTTCTATTATTTGCACATCAAGTTCAGCTGCCACAATGGGAGGCTTAGCTTCCCATTCCTATACAATATCAAAAGCAGGCATGCTAGGGTTAATGAGAAGTGCTGCATGTGAGTTGGGAGTTCATTTGATTCGCGTTAACTGCATTTCGCCTCACGGGGTTCCCTCGGAGATGCTTCTCAGTGCTTACAGAAGGTTTGGGATAGAGGATATTAAGCCTGAAGATGTGACTGAAATGGTTGGCAAGAGGGCAAGTTTGCTGCAAGGGAGAGGTGCAACTTTAGAAGATGTAGCACAAGCTGCTTTGTTTCTTGCTAGTGAAGATTCTGGCTTCATAACAGGACATGAACTTGTTGTAGATGGAGGATACACTTCTGCTAACAGTGCCATGAGTTATATCTATCGTCATAAAGAAGATGGCATTGGAAACAATTA 1055 0.4635 MGGKGGSGGGGGSGSRGSGGGGGGGGGYMKAPGGGGAYVSRDAFESDPKAYFMIICPWNPENASKRADSATYRLDVMFGLIGKVTVVTGGARGIGAATAKLFAKNGAHVVIADILDDLGADLAESIGGRYIHCDVSKEQDVESAIELALSWKGHLDIMFSNAGISGIEGSITTIDMEQVKRLLSINLHGTIHGIKHAARAMIESKNGGSIICTSSSAATMGGLASHSYTISKAGMLGLMRSAACELGVHLIRVNCISPHGVPSEMLLSAYRRFGIEDIKPEDVTEMVGKRASLLQGRGATLEDVAQAALFLASEDSGFITGHELVVDGGYTSANSAMSYIYRHKEDGIGNN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00401 351 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 73 341 - -
Bva11g00401 351 Pfam Enoyl-(Acyl carrier protein) reductase 89 331 - -
Bva11g00401 351 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 215 243 IPR020904 GO:0016491
Bva11g00401 351 MobiDBLite consensus disorder prediction 1 23 - -
Bva11g00401 351 Gene3D - 73 338 - -
Bva11g00401 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 331 IPR036291 -
Bva11g00401 351 PRINTS Glucose/ribitol dehydrogenase family signature 153 164 IPR002347 -
Bva11g00401 351 PRINTS Glucose/ribitol dehydrogenase family signature 202 218 IPR002347 -
Bva11g00401 351 PRINTS Glucose/ribitol dehydrogenase family signature 84 101 IPR002347 -
Bva11g00401 351 PRINTS Glucose/ribitol dehydrogenase family signature 249 266 IPR002347 -
Bva11g00401 351 PRINTS Glucose/ribitol dehydrogenase family signature 294 314 IPR002347 -
Bva11g00401 351 PRINTS Glucose/ribitol dehydrogenase family signature 228 247 IPR002347 -
Bva11g00401 351 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE ATA1 73 341 - -
Bva11g00401 351 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 164 IPR002347 -
Bva11g00401 351 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 216 IPR002347 -
Bva11g00401 351 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 228 247 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00401 Bva-Chr11 7755114 7759052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00401 74 331 Acyl Lipid Metabolism Gene Families AT3G55290 29.104 1.39e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00401 - - pvu:PHAVU_008G022500g 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00401 11 7755114 7759052 Bva11g00401 11 7755114 7759052 ECH