Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00298 ATGGATGAAGTGCTTTCCCCAAGTGACCAACAGAGGATGGTCTCCTCCTTCTTGGAGATCGCTGAAGGGCAAACCGCCGACACGGCTAGACAATTCTTGCAGGCTACAGGATGGAGACTTGAGGATGCCATTCAGTTGTTCTTGATTAATAATGAAAGTGGGGTGTTACCACAACCAGCATCATTAAACAGCCGGCCTGCAGAAAACGTGGACTCCTGGCCTCAACCTTCGAGTGAGCTGGGAGATGCTGCAAATGAAGGTCGCAGTCACAATGATGGAGATGATGTACGCCCTCCTATACCTGTTATAAGGGAAACTCTTTACGATGATGCAATTCTGTATGgAACATCAAGGATGGGACCTCGTTCACAAGAAGCAAGTTCCCTGATTGCTTTCCGAAATTTTGAAGAGGAAATGAGACGCCCCGGGGTTTGGGAATCAGAGCAAGGTGTTGCATCAACAGCTGAGAGTTCAAGGGATAATCTTGCTTCGCTTTATCGCCCTCCTTTTCATCTGATGTTTCATGGTCCATTTGATAAgGCAAAAAGTGCTTCATCCATGCAGGACAAATGGCTCTTGGTGAACATACAATCCACTAAGGAGTTCAGCTCACACATGCTTAATCGGGACACATGGGCAAATGAAGCTGTTTCTCAAAccataaatacaaattttatattctggCAGGTATATGATGATACAACTGAAGGAAAAAAGGTCTGCACCTATTACAAGCTCGATTTGGCTCCTGTAGTGCTTATTATTGATCCCATCACAGGGCAAAAGATGCGCTCCTGGGTTGGAATGGTTCAACCTGAAAGCTTGTTGGAGGGTCTACTACCATTCCTGGATGCTGGCCCCAAGGATCATCATATTACCCTGTCTCACAAACGCCCAAGAGAAAGTTCTAGTCCACCTAAAACTAAAGAAGAAAGGaatgaagaagatgaggaAATACAGAGAGCTCTGGCAGCTTCTATGGAAAGCATGAAAGAATCAAGTGCAGCAGCCGTGAGAGAAAATGATGCAAATTTTGCTGTCAAGgatcaagaaaaagaattgccTAAGAGGCCAACATTTCCACCTCTGCCTGAAGAACCTAAGGGTGATAAGAGCCTCCTATGCAGAGTTGGAGTCCGGCTTCCTGATGGACGTCGCGTTCAGCGTAACTTTTTGCGCACTGATCAAATTCAGCTGCTATGGTCATTCTGTGCTGCTCAACTAGgagaagatgaaagaaaaccGTTCCGATTAACGCAAGCGATACCAGGGGCATCCAAGACTCtggattataaaaataatttgacctTTGACGAATCCGGGCTCGCGAACTCAATGATCTCATTGACATGGGACTG 1358 0.4308 MDEVLSPSDQQRMVSSFLEIAEGQTADTARQFLQATGWRLEDAIQLFLINNESGVLPQPASLNSRPAENVDSWPQPSSELGDAANEGRSHNDGDDVRPPIPVIRETLYDDAILYGTSRMGPRSQEASSLIAFRNFEEEMRRPGVWESEQGVASTAESSRDNLASLYRPPFHLMFHGPFDKAKSASSMQDKWLLVNIQSTKEFSSHMLNRDTWANEAVSQTINTNFIFWQVYDDTTEGKKVCTYYKLDLAPVVLIIDPITGQKMRSWVGMVQPESLLEGLLPFLDAGPKDHHITLSHKRPRESSSPPKTKEERNEEDEEIQRALAASMESMKESSAAAVRENDANFAVKDQEKELPKRPTFPPLPEEPKGDKSLLCRVGVRLPDGRRVQRNFLRTDQIQLLWSFCAAQLGEDERKPFRLTQAIPGASKTLDYKNNLTFDESGLANSMISLTWD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00298 452 SUPERFAMILY UBA-like 8 48 IPR009060 GO:0005515
Bva11g00298 452 SMART 45neu3 161 284 IPR006577 -
Bva11g00298 452 PANTHER UBX DOMAIN-CONTAINING PROTEIN 4 452 - -
Bva11g00298 452 PANTHER FAS-ASSOCIATED PROTEIN 4 452 - -
Bva11g00298 452 SUPERFAMILY Thioredoxin-like 155 290 IPR036249 -
Bva11g00298 452 MobiDBLite consensus disorder prediction 350 369 - -
Bva11g00298 452 MobiDBLite consensus disorder prediction 59 84 - -
Bva11g00298 452 MobiDBLite consensus disorder prediction 85 99 - -
Bva11g00298 452 Pfam UBX domain 375 428 IPR001012 GO:0005515
Bva11g00298 452 MobiDBLite consensus disorder prediction 290 318 - -
Bva11g00298 452 PIRSF UCP037991_UBX_2_7 4 452 IPR017346 -
Bva11g00298 452 Gene3D - 368 450 - -
Bva11g00298 452 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 314 333 IPR003903 -
Bva11g00298 452 Gene3D - 7 50 - -
Bva11g00298 452 MobiDBLite consensus disorder prediction 59 100 - -
Bva11g00298 452 CDD UAS 173 285 - -
Bva11g00298 452 Pfam Thioredoxin-like 178 257 - -
Bva11g00298 452 Pfam UBA-like domain 13 52 - -
Bva11g00298 452 CDD UBA_TAP-C_like 17 48 - -
Bva11g00298 452 ProSiteProfiles UBX domain profile. 370 450 IPR001012 GO:0005515
Bva11g00298 452 SUPERFAMILY Ubiquitin-like 361 451 IPR029071 -
Bva11g00298 452 CDD UBX 376 450 - -
Bva11g00298 452 Gene3D Glutaredoxin 175 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00298 Bva-Chr11 6675440 6683728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00298 K24350 - gmx:100780532 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00298 11 6675440 6683728 Bva11g00298 11 6675440 6683728 ECH