Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00256 ATGAGTTCCGCTTTAGTCACTGCTTCGTCTTCTCTTTTCCACTTCAATTCCAACTCTGCAAAACCAACCCAACTACCAAATCTTCGTTTCACAGCTCCGATTCTTCACAATTCTCGCTCTTTTCCTCGTTTCAGGGCTTCTTCGAGCAATGTCTCCAATAGTGGTGAGAGCAGCGGCAAACCCATTTTTCAGAAGCTCAAAAGTTTAGCTGGAGCTGCAATTCTCGTGGGTACTACTGCGTTGATGACTGGAAGGTTCTCTCAGTTACCTGCCAGAGCTGAATCTCCGGTTGCCGTTACTGAACAAGAAGCAGATAAAGGTCAGGTTTTTGAAGAAGAGAAGGGAAATGATCGGAGCTCGCCGTTGTCAGATTTTCTTGAAACGAATTCTCAAGCTGTTGATGCGCTGAAATCTCTTCTGCAGCAAAAGCTCGAGAATGGGGAGGACGAAGAGGCGTTGAAGATCGTGAAAAGTTTAGCCTCTGCGCAACCGGCGGAAACAGAATGGAAATTTCTCATGGCAAGGTTAATGAACGAAATGGGTTTCTTTGAAAATGCACGTAAGGTGTATGAGGAAATTCTTGCATCAAATCCTTTATCTTTCGAGGCTTTATTTGAGAATGCTTTGTTAATGGATCGTTCTGGGGAAGGCGGAGCGGTGATTAAGCGGTTAGAGGAAGCTTTGGCTATTGCAGAGGAGGAACACAAGGCAAAGGAAGCACGTGATGTCAAGTTGATAATGGCCCAGATACAGTTTCTGCAGAAGAATGTGGAGGAAGCTTTGAACATGTATCAACAGCTGACAAATGAGGACCCAAAGGATTTCAGGCCATACTTTTGCCGGGGAATGATTTATAGTTTGCTTGATAAGAATGATGAGGCAAAGGAGCAATTTGATAAGTACAAGGAGTTATCACCAAGAAAGTTTGAGGTTGAGGGATATTTGAGGACCCCTTTGTCAAAGATGAAACTTTTCGGGACAGATGAGAACTG 992 0.4415 MSSALVTASSSLFHFNSNSAKPTQLPNLRFTAPILHNSRSFPRFRASSSNVSNSGESSGKPIFQKLKSLAGAAILVGTTALMTGRFSQLPARAESPVAVTEQEADKGQVFEEEKGNDRSSPLSDFLETNSQAVDALKSLLQQKLENGEDEEALKIVKSLASAQPAETEWKFLMARLMNEMGFFENARKVYEEILASNPLSFEALFENALLMDRSGEGGAVIKRLEEALAIAEEEHKAKEARDVKLIMAQIQFLQKNVEEALNMYQQLTNEDPKDFRPYFCRGMIYSLLDKNDEAKEQFDKYKELSPRKFEVEGYLRTPLSKMKLFGTDEN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00256 330 ProSiteProfiles TPR repeat profile. 275 308 IPR019734 GO:0005515
Bva11g00256 330 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 86 329 - -
Bva11g00256 330 MobiDBLite consensus disorder prediction 97 122 - -
Bva11g00256 330 Pfam Tetratricopeptide repeat 245 273 IPR019734 GO:0005515
Bva11g00256 330 SUPERFAMILY TPR-like 127 311 IPR011990 GO:0005515
Bva11g00256 330 Coils Coil 243 270 - -
Bva11g00256 330 Gene3D Tetratricopeptide repeat domain 120 243 IPR011990 GO:0005515
Bva11g00256 330 SMART tpr_5 275 308 IPR019734 GO:0005515
Bva11g00256 330 SMART tpr_5 241 274 IPR019734 GO:0005515
Bva11g00256 330 PANTHER PROTEIN SLOW GREEN 1, CHLOROPLASTIC 86 329 - -
Bva11g00256 330 Coils Coil 221 241 - -
Bva11g00256 330 MobiDBLite consensus disorder prediction 105 120 - -
Bva11g00256 330 Gene3D Tetratricopeptide repeat domain 244 317 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00256 Bva-Chr11 6000864 6002186 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00256 - - csv:101212982 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00256 11 6000864 6002186 Bva11g00256 11 6000864 6002186 ECH