Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00088 ATGGGCTTCAAGGGCTGCTTCCCACCTCAGGATTTCTGTTTTCCAAAGAAGCTTTTCCATTgTTCTGAAAGACCTGAATATTTTAACTCCCATGAGTGGGTGACAGTTGATGGAAATTCTGCACCTGTTGGCATAACCGATCATGCTCAAGATCACTTGGGTGACGTTGTGTATGTAGAACTGCCTGAAGTGGGCGCAGCTGTGATACAAGGTAAAAGTTTTGGTCCAGTTGAAAGTGTGAAGCAAACCAGTGATATATA 260 0.4346 MGFKGCFPPQDFCFPKKLFHCSERPEYFNSHEWVTVDGNSAPVGITDHAQDHLGDVVYVELPEVGAAVIQGKSFGPVESVKQTSDI 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00088 86 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 26 86 - -
Bva11g00088 86 Gene3D - 13 86 - -
Bva11g00088 86 CDD GCS_H 27 86 IPR033753 -
Bva11g00088 86 Pfam Glycine cleavage H-protein 27 86 IPR033753 -
Bva11g00088 86 SUPERFAMILY Single hybrid motif 26 86 IPR011053 -
Bva11g00088 86 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 26 86 IPR002930 GO:0005960|GO:0019464
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00088 Bva-Chr11 3032218 3034461 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00088 K02437 - rcu:8267572 107.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00088 11 3032218 3034461 Bva11g00088 11 3032218 3034461 ECH