Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01037 ATGGTAAAGGAGACCGAATACTATGACGTGCTGGGAGTGAGTCCCACGGCAACCGAATCCGAGATTAAAAAAGCTTATTACATAAAGGCACGACAAGTACATCCAGATAAAAACCCAAATGATCCTCTCGCAGCACAAAATTTTCAGGTTTTGGGTGAGGCTTACCAAGTTTTGAGTGACCCAGCTCAACGGCAAGCGTATGATGTGCATGGGAAATCTGGAATCTCAACGGAAGCAATTATTGATCCAGCTGCAATCTTTGCAATGCTTTTTGGTAGTGAGCTTTTTGAAGAATATATAGGCCAGTTAGCCATGGCGTCAATGGCCTCCATGGACATTTTTACTGAAGGAGAACAATTTGATCCCAAAAAGTTGCAAGAGAAAATGAGGGTTATTCAgaaggagagagaagaaaggcTTGCAGAAATACtgaaaaatagattaaatcaatattttcacGGAAACAAAGAGGACTTTATCATTCATGCAGAAGCTGAAGTAGACCGTCTATCCAATGCAGCTTATGGTGTTGATATGTTGAATACCATCGGCTACATATATGCAAGGCAGGCAGCAAAAGAGCTTGGGAAGAAAGCAATTTATTTGGGAGTTCCTTTTATTGCTGAATGGTTTAGAAACAAAGGGCATTTCATCAAATCCCAAGTTACAGCAGCAACAGGGGCAATTGCTTTGATCCAGTTGCAAGAGGATATGAAGAAGCAACTAAGTGCAGAAGGAAACTATACAGAAGAAGAACTCGAAGAATACATGCAATCTCACAAGAAATTAATGATTGACTCTTTGTGGAAGCTTAATGTAGCTGATATTGAGGCCACTCTTTCCCGTGTTTGTCAAATgGTTCTTCAAGACAATAGTGCTAAAAAAGAAGAACTGCGTGCACGAGCAAAAGGCTTGAAAAATCTTGGTAAAATTTTCCAGAGGGTTAAGTTGGCCAAGGTGAATGAGACGGAAAGTGTGCCGACCAATGCCGTACATAAGTTGAATGGGAGTGAACCAAGCAATTATGCTTGTTCTCCCAGTACATCTCCCAAATCTTCAAATCCTGATTTTTCATCTCACGCTATATCTGTTTCCCAGAGCCCCTATGTGGAGGCTCCGCAGTTTGCAGGTATGAGGTATGACCGTGATTTCCCGAGGCCAACCGCCCCACCCGGTGCTCAGAGACCTCCTCCGACCAGCAGGGATTG 1208 0.4131 MVKETEYYDVLGVSPTATESEIKKAYYIKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDVHGKSGISTEAIIDPAAIFAMLFGSELFEEYIGQLAMASMASMDIFTEGEQFDPKKLQEKMRVIQKEREERLAEILKNRLNQYFHGNKEDFIIHAEAEVDRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSAEGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNSAKKEELRARAKGLKNLGKIFQRVKLAKVNETESVPTNAVHKLNGSEPSNYACSPSTSPKSSNPDFSSHAISVSQSPYVEAPQFAGMRYDRDFPRPTAPPGAQRPPPTSRD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01037 402 SMART dnaj_3 5 63 IPR001623 -
Bva10g01037 402 CDD DnaJ 6 60 IPR001623 -
Bva10g01037 402 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Bva10g01037 402 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 371 - -
Bva10g01037 402 PANTHER CHAPERONE PROTEIN DNAJ 10-LIKE ISOFORM X1 1 371 - -
Bva10g01037 402 MobiDBLite consensus disorder prediction 329 402 - -
Bva10g01037 402 MobiDBLite consensus disorder prediction 329 370 - -
Bva10g01037 402 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Bva10g01037 402 PRINTS DnaJ domain signature 26 41 IPR001623 -
Bva10g01037 402 PRINTS DnaJ domain signature 43 63 IPR001623 -
Bva10g01037 402 PRINTS DnaJ domain signature 63 82 IPR001623 -
Bva10g01037 402 PRINTS DnaJ domain signature 8 26 IPR001623 -
Bva10g01037 402 Pfam X-domain of DnaJ-containing 133 324 IPR026894 -
Bva10g01037 402 Coils Coil 288 308 - -
Bva10g01037 402 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Bva10g01037 402 Gene3D DnaJ domain 1 84 IPR036869 -
Bva10g01037 402 Pfam DnaJ domain 6 68 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01037 Bva-Chr10 7540416 7550979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01037 22 68 Miscellaneous Gene Families AT1G16680 53.191 1.63e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01037 - - cam:101512264 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01037 10 7540416 7550979 Bva10g01037 10 7540416 7550979 ECH