Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01025 ATGGGTTTGTCCAAAACACTTGTGGTTCTGGCCTGCTGCATTTCCTTTTGTGTGTTTGCAGCTTTTGGGCATGATTTATCCATCGTAGGATATTCGCCGGAGGACTTGAAGTCCATGGATAAGCTGATTGACCTGTTTGAATCGTGGATGTCCAAACATGGCAAGATTTATGAAAGCATTGAGGAGAAGTTACGGAGGTTCGACATTTTCAAGGACAACCTCAAGCACATAGACGAGACAAATAGGAAGACCAAAAACTACTGGCTTGGCCTCAACGAGTTTGCTGATTTGAGCCACCAAGAGTTTAAGAATAAGTACCTGGGCCTCAAACCCCAATTAATGTCTACGACAGAGGAGTTCACTTACAGAGATCACGTTGTTGATTTGCCCAAGTCTGTGGATTGGAGGAAGAAAGGTGCTGTTAGTCCTGTCAAGAACCAAGGCTCATGcgGTAGCTGTTGGGCATTTTCAACAGTTGCGGCGGTTGAGGGAATAAACCAGATAGTGACAGGAAATTTAACATCTCTGTCCGAGCAAGAGTTGATTGATTGCGACACAAGTTACAATAATGGGTGCAATGGGGGTCTGATGGACTATGCATTTGCCTATATAGTCGCTAAAGGCGGGATTCACAAGGAGGAAGACTATCCTTACATGATGGAGGAAGGCACGTGTGAGATGAGaaagGAAAAATCTGAGGTGGTGACCATTAGTGGTTACCATGACGTGCCAGCCAACAATGAGCAGATCCTGTTGAAGGCACTTGCCAACCAACCCCTTAGTGTGGCCATAGAGGCTTCAGGCAGAGATTTCCAGTTCTACAGCGGGGGTGTCTTCGATGGTCATTGCGGAAGCGAACTTGATCACGGTGTGGCTGCTGTTGGATATGGGACATCCAAAGGATTGGATTATATCATCGTAAAAAATTCATGGGGCCCAAAGTGGGGTGAGAAAGGCTACATAAGGATGCGAAGGAACATTAAAGGCAAGCCAGAAGGTCTCTGCGGAATTTACAAGATGGCTTCCTATCCCACCAAGAACAAATA 1046 0.457 MGLSKTLVVLACCISFCVFAAFGHDLSIVGYSPEDLKSMDKLIDLFESWMSKHGKIYESIEEKLRRFDIFKDNLKHIDETNRKTKNYWLGLNEFADLSHQEFKNKYLGLKPQLMSTTEEFTYRDHVVDLPKSVDWRKKGAVSPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTSYNNGCNGGLMDYAFAYIVAKGGIHKEEDYPYMMEEGTCEMRKEKSEVVTISGYHDVPANNEQILLKALANQPLSVAIEASGRDFQFYSGGVFDGHCGSELDHGVAAVGYGTSKGLDYIIVKNSWGPKWGEKGYIRMRRNIKGKPEGLCGIYKMASYPTKNK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01025 348 SMART pept_c1 129 345 IPR000668 GO:0006508|GO:0008234
Bva10g01025 348 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 287 297 IPR025660 -
Bva10g01025 348 CDD Peptidase_C1A 130 344 IPR039417 -
Bva10g01025 348 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 147 158 IPR000169 -
Bva10g01025 348 PRINTS Papain cysteine protease (C1) family signature 147 162 IPR000668 GO:0006508|GO:0008234
Bva10g01025 348 PRINTS Papain cysteine protease (C1) family signature 304 310 IPR000668 GO:0006508|GO:0008234
Bva10g01025 348 PRINTS Papain cysteine protease (C1) family signature 289 299 IPR000668 GO:0006508|GO:0008234
Bva10g01025 348 PANTHER - 23 346 - -
Bva10g01025 348 SUPERFAMILY Cysteine proteinases 41 345 IPR038765 -
Bva10g01025 348 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 23 346 - -
Bva10g01025 348 Pfam Cathepsin propeptide inhibitor domain (I29) 46 102 IPR013201 -
Bva10g01025 348 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 304 323 IPR025661 -
Bva10g01025 348 Gene3D Cysteine proteinases 25 347 - -
Bva10g01025 348 Pfam Papain family cysteine protease 129 345 IPR000668 GO:0006508|GO:0008234
Bva10g01025 348 SMART Inhibitor_I29_2 46 102 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01025 Bva-Chr10 7479964 7481435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01025 K16290 - gmx:100788466 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01025 10 7479964 7481435 Bva10g01025 10 7479964 7481435 ECH