Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01024 ATGAAAGGAGACGTGCTAGTGGCTATAGCCGCTTCAATCGGTAATTTTCTGCAAGGATGGGATAATGCTACAATTGCCGGTGCCATTGTTTACATTAAGAAGGATCTTGCTTTGGAAACTACTGTGGAGGGGCTTGTAGTGGCCATGTCCCTGATTGGGGCAACGTTAATCACAACATGCTCTGGTCCCATATCAGATTGGCTCGGTCGACGTCCTATGTTGATAATCTCATCTATGCTTTATTTCTTAGGTGGCTTGGTGATGTTCTGGTCCCCTAATGTGTACGTGTTATGCCTAGCAAGGCTAATAGACGGGTTTGGAATTGGCCTTGCTGTTACTCTTGTCCCTGTCTATATATCTGAAACTGCCCCATCTGATATAAGGGGATCGCTAAACACACTTCCACAATTTACTGGTTCTGGAGGAATGTTCTTATCATATTGTATGGTTTTTGGGATGTCAATGACATCCTCGCCTAGCTGGAAACTAATGCTTGGGGTTCTTTCTATTCCTTCTCTCATCTATTTTGtgttaacaatatttttcttgccTGAGTCTCCTCGGTGGCTGGTGAGCAAAGGAAAGATGCTTGAAGCTAAAAAGGTTCTCCAAAGATTACGTGGCAGGGAAGATGTTTCAGGTGAGATGGCACTGCTGGTTGAGGGTCTTGGGATTGGAGGTGAAACATCTATAGAAGAATACGTGATAGGACCTGCCGATGGAGTGACTGATGGTCAGAAAGATAAATTCCGATTGTATGGATCCCAAGCAGGTCTCTCTTGGGTTGCAAAACCTGTGGCTGGCCAgagttctctttttcttgcatCTCGGCAGGGAAGCATTGCAAACCAAAGCATGCCTCTCATGGACCCTCTTGTGACTTTGTTTGGTAGTGTTCATGAGAAGCTCCCTGAGACAGGAAGTACAAGAAGCATgctttttccaaattttggAAGCATGTTCAGCACAGCTGAGCATCAAGTTAAAAATGAACAGTGGGATGAAGAGAGCCTACAAAGAGAAGGTGAGGACTATGCATCAGATGGTGCTGCTGGGGACTCTGATGACAATTTGCATAGTCCCTTAATCTCACGTCAAACTACGAGCCTTGAAAAGGACATGCCCCCTCCACCTTCCCATGGCAGTATCTTTAGCAGCATGAGGCGTCACAGTAGTCTTATGCAAGGATCAGGTGAGGCAGTTGGCAGTACAGGCATTGGCGGTGGCTGGCAACTGGCATGGAAATGGTCTGAGAGAGAAGGTGAGGATGGAAAAAGGCAAGGAGGTTTTCAAAGAATTTATTTGCACCAGGAGGGTGTTCCTGGATCTCGACGTGGATCCCTTGCATCAATTCCTGGTGAAGTCCCTGCAGAAGGTGAATTTGTCCAGGCTGCTGCCTTGGTCAGCCAACCTGCTCTTTACTCCAAGCACCTTATTGATCAGCAACCAGTAGGCCCTGCAATGCTTCATCCATCCGAGACTGCTTCAAAGGGGCCAATTTGGAAAGCTCTTCTTGAACCAGGGGTTAAGCATGCATTGTTTGTCGGGATTGGAATACAAATACTTCAGCAGTTTTCTGGGATAAATGGGGTTCTATATTACACCCCTCAAATCCTCGAAGAGGCAGGAGTAGAAGTTCTTCTTGAAGACATAGGCCTTGGTTCAGAATCTGCATCATTCCTTATCAGTGCATTGACAACCTTGTTGATGCTTCCATGTATAGGTTTGGCCATGAGGTTTATGGATATCTCGGGCAGAAgGCAACTCTTACTGTGTACGATTCCAGTGCTGATAGTGGCACTGATAATTTTGGTGATTGGAAAGCTAGTGGGGTTGGGAACAACAGTGGATGCAGTAATCTCAACAGCATGCGTAGTGGTATATTTCTGTTGCTTTGTGATGGCGTATGGGCCAATCCCAAACATCCTATGCTCAGAGATATTTCCAACGAGGGTCCGTGGGCTCTGCATTGCTATATGCGCGTTGGTGTTCTGGATTGGAGACATCATCGTCACTTACACACTGCCTGTCATGCTCAGTTCCCTGGGACTCGCCGGTGTCTTCGGCATTTATGCTGTGGTCTGTGTGATCTCCTGGATATTCGTGTTTTTGAAGGTTCCAGAAACCAAAGGCATGCCTCTAGAGGTCATTACCGAATTCTTTGCTGTTGGTGCAAGACAAGCTGCCACTTCCAAGAACGAATA 2204 0.4542 MKGDVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALETTVEGLVVAMSLIGATLITTCSGPISDWLGRRPMLIISSMLYFLGGLVMFWSPNVYVLCLARLIDGFGIGLAVTLVPVYISETAPSDIRGSLNTLPQFTGSGGMFLSYCMVFGMSMTSSPSWKLMLGVLSIPSLIYFVLTIFFLPESPRWLVSKGKMLEAKKVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYVIGPADGVTDGQKDKFRLYGSQAGLSWVAKPVAGQSSLFLASRQGSIANQSMPLMDPLVTLFGSVHEKLPETGSTRSMLFPNFGSMFSTAEHQVKNEQWDEESLQREGEDYASDGAAGDSDDNLHSPLISRQTTSLEKDMPPPPSHGSIFSSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWSEREGEDGKRQGGFQRIYLHQEGVPGSRRGSLASIPGEVPAEGEFVQAAALVSQPALYSKHLIDQQPVGPAMLHPSETASKGPIWKALLEPGVKHALFVGIGIQILQQFSGINGVLYYTPQILEEAGVEVLLEDIGLGSESASFLISALTTLLMLPCIGLAMRFMDISGRRQLLLCTIPVLIVALIILVIGKLVGLGTTVDAVISTACVVVYFCCFVMAYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIVTYTLPVMLSSLGLAGVFGIYAVVCVISWIFVFLKVPETKGMPLEVITEFFAVGARQAATSKNE 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01024 734 Gene3D MFS general substrate transporter like domains 4 253 IPR036259 -
Bva10g01024 734 Gene3D MFS general substrate transporter like domains 494 732 IPR036259 -
Bva10g01024 734 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bva10g01024 734 Pfam Sugar (and other) transporter 499 721 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva10g01024 734 Pfam Sugar (and other) transporter 7 220 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva10g01024 734 PANTHER - 1 731 - -
Bva10g01024 734 CDD MFS_GLUT_like 511 708 - -
Bva10g01024 734 MobiDBLite consensus disorder prediction 328 347 - -
Bva10g01024 734 CDD MFS_GLUT_like 10 191 - -
Bva10g01024 734 ProSitePatterns Sugar transport proteins signature 2. 103 128 IPR005829 GO:0016021|GO:0022857|GO:0055085
Bva10g01024 734 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 710 IPR020846 GO:0022857
Bva10g01024 734 MobiDBLite consensus disorder prediction 328 361 - -
Bva10g01024 734 SUPERFAMILY MFS general substrate transporter 4 715 IPR036259 -
Bva10g01024 734 PRINTS Sugar transporter signature 645 657 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva10g01024 734 PRINTS Sugar transporter signature 523 533 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva10g01024 734 PRINTS Sugar transporter signature 622 643 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva10g01024 734 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva10g01024 734 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bva10g01024 734 PANTHER MONOSACCHARIDE-SENSING PROTEIN 1 1 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01024 Bva-Chr10 7472909 7477550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01024 1 734 Organic Solute Cotransporters AT4G35300 70.027 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01024 - - gmx:100811857 1234.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01024 10 7472909 7477550 Bva10g01024 10 7472909 7477550 ECH