Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01014 ATGCTTTCTGATAGTTTGGGGGGAGACGAATCAATTTGTCAAGATTTTGAGGGTTTGAGCGTATCAAAGCGACTTGTGAGGAGCGTCAGTCAGAAGTtgaggaaaaagaataataaaggTCGAGGGGAAGAAGATAACACTGCAAAGGGACTTTCTTTGAGATGCCTAACTCTGTACAGTAGAGGTGGGGGCTGCAAGGTAGGTGCTGACACTAGTGATGAATTTGGGGATTCAAGCAGTAGAAGGAGGTCCAGTGCCAGTGAAGAAAGCAAGGGATATAAACCAATTTGTGGTCCTGAAGAAACTACTGTAGATTGCTTCCCATATGGGATGAAGGAAAGGTTCTGGAGAAAACACAACAGAAAGGATTCTGAACTTGAAGAATCAGTAAGGAACAGTAGAATGCATATCTTTCTTCCAGATGACATTCTTGAAATGTGCTTGGTACGGCTCCCCTTGACGAGTCTCATGAATGCTCGCCTTGTGTGTAAGAAATGGAAGTTCTTGACTACCACTCCTAGATTCCTTCAAATGAGACGGGAAGGTTCATATCCATGGTTATTTCTGTTTGGTGCTGTTAAAGATGGCTTCTGCTCTGGTGAGATTCATGCATTGGATGTTTCTCTTAATCAATGGCataaaatagatgctaatttgCTCCAAGGAAGGTTCATGTTCTCTGTTGCAAGTATGCAGGATGATATATTCATTGTTGGAGGATGTTCTAGCTTGACTAACTTCGGAAAGGTGGATAGAAACTCATTTAAGACACACAAAGGGGTGCTGATGTTTAGTCCCTTGACAAGATCTTGGCGTAAAATATCATCTATGAAATACGCTAGATCAATTCCTATACTTGGAGTTTCTGAAGTCAGTCTAGATTATTCAACGAGTCATGGTCATCAAAGCCGGCAGGATAGACGTTTCCCCAGAACAAGGATTGGTGGCGTTTCTGATGTCTATGAGGATCCTCATAAGCTTTCAGTGAGACGTCAGTGCAGATCTGCTTTCAATGAGAATGAGGCTTCATCTTTACCCAGTCGAAAGTCATACAAGTTCACTAAACAAAAAAGTGATCAGTCAACCTCAAAATGTAGTAAAAGATTTGTCTTGATAGCTGTTGGAGGTGTTGGACCGTGGGATGAGCCTCTGGATTCTGGAGAAATTTATGATTCCGTGTCAAATAAATGGACTGAAATCCAGAGATTACCTTTAGATTTTGGGGTTGCTTGTTCTGGGGTTGTTTGTGGCAGGATGTTTTATGTTTACTCTGAAACCGACAAACTTGCAGCATATGACATAGAACGAGGTTTTTGgatttcaattcaaacaacTCCATTCCCACCTCGCGTACATGAATACTACCCTAAACTTGTATCTTCTAATGGCCGTCTTTTCATGCTTTCAGTGTCATGGTGTGAAGGGGATGGTCAAATTGGGCGGCGAAACAAGGCTGTTCGAAAATTATGGGAGTTAGATCTCATGTGTCTTAATTGGACCCAAGTCTCAGTGCATCCTGATGCTCCAATGGACTGGAATGCAGTTTTCGTGGCAGACAGAAACCTTATTTTTGGGGTAGAAATGTTCAAAATATTTGGTCAGGTGCTGAATTTCTTCACAGTATGCAATGTGTCTGATATGTCTAAGTGGAGCCATATTTCAAGAAATCATGAACTGGATGCTTCTTCATGCTTGACCAAATCAATGGCAGTTGTACACCTTTG 1724 0.4072 MLSDSLGGDESICQDFEGLSVSKRLVRSVSQKLRKKNNKGRGEEDNTAKGLSLRCLTLYSRGGGCKVGADTSDEFGDSSSRRRSSASEESKGYKPICGPEETTVDCFPYGMKERFWRKHNRKDSELEESVRNSRMHIFLPDDILEMCLVRLPLTSLMNARLVCKKWKFLTTTPRFLQMRREGSYPWLFLFGAVKDGFCSGEIHALDVSLNQWHKIDANLLQGRFMFSVASMQDDIFIVGGCSSLTNFGKVDRNSFKTHKGVLMFSPLTRSWRKISSMKYARSIPILGVSEVSLDYSTSHGHQSRQDRRFPRTRIGGVSDVYEDPHKLSVRRQCRSAFNENEASSLPSRKSYKFTKQKSDQSTSKCSKRFVLIAVGGVGPWDEPLDSGEIYDSVSNKWTEIQRLPLDFGVACSGVVCGRMFYVYSETDKLAAYDIERGFWISIQTTPFPPRVHEYYPKLVSSNGRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMCLNWTQVSVHPDAPMDWNAVFVADRNLIFGVEMFKIFGQVLNFFTVCNVSDMSKWSHISRNHELDASSCLTKSMAVVHL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01014 574 PANTHER OS09G0555300 PROTEIN 1 574 - -
Bva10g01014 574 Pfam Kelch motif 223 277 IPR006652 GO:0005515
Bva10g01014 574 Pfam Kelch motif 371 402 IPR006652 GO:0005515
Bva10g01014 574 PANTHER OS09G0555300 PROTEIN 1 574 - -
Bva10g01014 574 ProSiteProfiles F-box domain profile. 133 179 IPR001810 GO:0005515
Bva10g01014 574 Gene3D - 183 290 IPR015915 GO:0005515
Bva10g01014 574 MobiDBLite consensus disorder prediction 73 96 - -
Bva10g01014 574 Pfam F-box domain 139 175 IPR001810 GO:0005515
Bva10g01014 574 SUPERFAMILY Kelch motif 185 525 IPR015915 GO:0005515
Bva10g01014 574 MobiDBLite consensus disorder prediction 75 89 - -
Bva10g01014 574 Gene3D - 137 182 - -
Bva10g01014 574 Gene3D - 344 564 IPR015915 GO:0005515
Bva10g01014 574 SMART fbox_2 139 179 IPR001810 GO:0005515
Bva10g01014 574 SUPERFAMILY F-box domain 138 193 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01014 Bva-Chr10 7434771 7437595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01014 - - gmx:100813797 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01014 10 7434771 7437595 Bva10g01014 10 7434771 7437595 ECH