Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01012 ATGGCGGGGCCGAATATGGATCAGTTCGAAGGTTATTTCAGGAGAGCAGATTTTGATGGGGATGGCAGAATAAGTGGAGCTGAAGCTGTCGCTTTCTTTCAGGGATCCAATTTGCCTAAGAACGTTCTTGCCCAGATATGGATGCATGCTGATCAGGCCAAAACTGGTTTCCTTGGGCGGGCAGAGTTTTATAATGCTCTCAAATTAGTAACCGTGGCACAGAGTAAGAGAGATTTAACACCTGATATAGTGAAGGCAGCATTATATGGTCCAGCTGCAGCTAAGATCCCTGCACCAAAGATTAATCTTGCTGCTATAGCTCCATCACAACCTAACCCTGTGGCTACTGCTTCTGCTCCATTGGTGGGTGCAACTGCACCAACAtcatctcaaacttttccttATAGAGGACAGGGATTGTCAGGTTCAATTGTCAACCAGATTCCTTCCCAGCAAAATCTGACCATGAGACCACCTCAACCTGTTGCAAGTAGTGCTTCCCGTCCACTACAGGATATTGCTGGTCCAGATCTTTCTAGAGGGGTTAACATGGCAGGTCACAATATGTCAAACTCAAGCCTATCAAATGAATGGAATAGTGGAAGGACTCGTTCAGTTCCTCCTATGTCTGGAGGTATACCTCCAACAGTGCCCTCATCCACGTCAACATCTCAAGCTCCATTCTCAGTGATGTCCCAACCAACAACTATGAACACTAAAGCATTATCTGGAAATGGATTCCCTTCCAATTCAGGCTTTGGCAATGATGTATACTCTACTGCCTCATCTACACCAAAACAAGAACCTACTGGGCAGCATTATTCTGCTAGCAGCCCACCTGCATCTTCAGTCATAGTTCCAATTTCCAGTGGTGTCCAACCTGCTAATAAGCACAGTGCCCTTGATTCATTACAGAATGCTTTCGCAATGCAGCCACTAAGCAGTCAGCTTCAGAGGCCACAGTCACCATCAAACCCTAACCAACAGATTTTGACACCggcttcttcttcatttccatcatctggGATATCAATTGTACCTGGAAATAGTAGCTCTGATAGTTCACAGCCTCCTTGGCCAAAAATGAAACCATCTGATGTGCAGAAGTATACAAAGGTGTTTATCGAGGTAGACACTGATAGGGATGGAAAGATCACTGGCGAGCAGGCTCGAAGTCTATTTTTAAGTTGGAGATTACCAatagAGGTCTTAAAGAAGGTGTGGGACTTATCTGATCAGGATAATGACAGCATGCTTTCTTTTAAGGAGTTTTGCTTTGCTCTCTATTTGATGGAGCGGTACAGGGAAGGTCATGCTCTTCCACCTTCTCTTCCAGGTAATGTTATGTTTGATGAGACACTGCTGTCCATGACAGGTCatccaaaaattatgcaagGAAATGCATCTTGGGGTGTAGGTCCAGGTTTTCAGCAACAACCAGTGATACCAGGTGCCCGGCCAGTGGCACCTGTAGCTGGTTTGAGGCCACCAGCACAAGGAACTTCTCCCCGGCCTGATGGTACTATGCCACCCAGTCATCCAAAGTCAGGAGCACCTTTGTTGGAGGATTCCTTTTTGAATAAAACTGATAATGGTGAacagaatatattaaaatcaaagtCTCAGGAGGCAACAACTGCTGGGGAAAAGGCTGAGGAAACAGAGAATGTGATCTTggattcaaaagaaaagattgagtTCTACCGCAACAAAATGCAGGAACTAGTTCTGTATAAAAGTAGATGTGATAATCGACTAAATGAGATTACAGAAAGGGCATCTGCAGACAAACGCGAGGCAGAGTCACTGGccaaaaaatatgaagagaaGTACAAACAGGTAGCAGAGATAGCTTCCAAATTGTCTATTGAAGAGGCTAAATTTCGTGATATACAGGAAAGAAAGATGGAGTTGCAGCAGGCTATTGTCAAAATGGAACAAGGAGGCAGTACAGATGGTATTCTTCAGGTCCGTGCTGATCGTATACAGTCAAATGTTGAGGAGTTATTAAGGGCTTTAGCTGAACGGTGCAAGAAACACAGCATAGATGTCAAGTCAATTACAATGGTTGAGCTTCCGATTGGTTGGCAACCTGGAATTCCTGAGGGAGCAGCTGATTGGGATGAAGATTGGGATAAATTTGAAGATGAAGGATTTGTCAATGATCTCACTGTTGATGTTAAAAATGTCTCATCAAAGCCAAAAGCCACATTTGTTGAACAACATTTGACTGATGATAATTCAAACCATGGCTCATCAATGAATACAAatggaaaacaagaaaattctgTAAGTAGTGGTGATTACACCCCTGATGGTGAATCTGCTCACACACACAGCGAAGATGACTTAAGAAGAAGCCCTCATGATAGTCCGGCTGGAAGAACAGCTGTAGATAGCCCCTCTCAGGAATTTTCCAATGTTCATTTTGGAAAAAGTTCTGAAACAGATGCTGAAATACACAgAAGTTTTGATGAATCATCGTGGGGTGCCTTTGACAATAATGATGATGTGGACTCAGTCTGGGGTTTTAACGGTGTTAATACCAAGGACTCTGATCTGGAGAGGCCGAGAGATATCTTTAAATCTGGTGATTTTGGTATTAACCCAGTTAAAACGGGATCTACACATACAGATGGCACGTTTCAGACTAAAAGCCCATTCACCTTCGATGATTCGGTGCCTGGGACTCCGCTTTCAAAGTTTGGAAACTCTCCAAGGTATAGTGAGGCAGGGGATCACTTCTTTGATAACATGTCAAGGTTTGATTCATTCAGCAAGCATGACAGTGGATATTCTCCCCAACCTGAGAGGCTTATGAGATTTGACTCCGTTAGTAGCAACAGAGACTTTGGCTACAACCATGAGAAATTGACAAGGTTTGATTCCATGAGTAGCAGCAAAGATTTTGGCTATAGTCGTGAAATGCTCTCAAGGTTTGATTCCATAAATAGCAGCAAAGATTTTGGTTATGGTCGTGAGAAGCACACAAGGTTTGACTCGATAAGTAGCAGCAAGGATTTCGGCCACAGCGGTGGATTCTCTTTTGACGACTCCGATCCATTTGGCTCTTCTGGCCCGTTTAAGGTCTCTTCAGATGGTCAGTCTCCAAAGAAAGGTTCTGATAATTGGAGTGCATtcta 3143 0.4203 MAGPNMDQFEGYFRRADFDGDGRISGAEAVAFFQGSNLPKNVLAQIWMHADQAKTGFLGRAEFYNALKLVTVAQSKRDLTPDIVKAALYGPAAAKIPAPKINLAAIAPSQPNPVATASAPLVGATAPTSSQTFPYRGQGLSGSIVNQIPSQQNLTMRPPQPVASSASRPLQDIAGPDLSRGVNMAGHNMSNSSLSNEWNSGRTRSVPPMSGGIPPTVPSSTSTSQAPFSVMSQPTTMNTKALSGNGFPSNSGFGNDVYSTASSTPKQEPTGQHYSASSPPASSVIVPISSGVQPANKHSALDSLQNAFAMQPLSSQLQRPQSPSNPNQQILTPASSSFPSSGISIVPGNSSSDSSQPPWPKMKPSDVQKYTKVFIEVDTDRDGKITGEQARSLFLSWRLPIEVLKKVWDLSDQDNDSMLSFKEFCFALYLMERYREGHALPPSLPGNVMFDETLLSMTGHPKIMQGNASWGVGPGFQQQPVIPGARPVAPVAGLRPPAQGTSPRPDGTMPPSHPKSGAPLLEDSFLNKTDNGEQNILKSKSQEATTAGEKAEETENVILDSKEKIEFYRNKMQELVLYKSRCDNRLNEITERASADKREAESLAKKYEEKYKQVAEIASKLSIEEAKFRDIQERKMELQQAIVKMEQGGSTDGILQVRADRIQSNVEELLRALAERCKKHSIDVKSITMVELPIGWQPGIPEGAADWDEDWDKFEDEGFVNDLTVDVKNVSSKPKATFVEQHLTDDNSNHGSSMNTNGKQENSVSSGDYTPDGESAHTHSEDDLRRSPHDSPAGRTAVDSPSQEFSNVHFGKSSETDAEIHRSFDESSWGAFDNNDDVDSVWGFNGVNTKDSDLERPRDIFKSGDFGINPVKTGSTHTDGTFQTKSPFTFDDSVPGTPLSKFGNSPRYSEAGDHFFDNMSRFDSFSKHDSGYSPQPERLMRFDSVSSNRDFGYNHEKLTRFDSMSSSKDFGYSREMLSRFDSINSSKDFGYGREKHTRFDSISSSKDFGHSGGFSFDDSDPFGSSGPFKVSSDGQSPKKGSDNWSAF 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01012 1047 MobiDBLite consensus disorder prediction 191 206 - -
Bva10g01012 1047 ProSiteProfiles EH domain profile. 366 449 IPR000261 GO:0005515
Bva10g01012 1047 SMART efh_1 8 36 IPR002048 GO:0005509
Bva10g01012 1047 SMART efh_1 369 397 IPR002048 GO:0005509
Bva10g01012 1047 SMART efh_1 403 431 IPR002048 GO:0005509
Bva10g01012 1047 SMART efh_1 42 70 IPR002048 GO:0005509
Bva10g01012 1047 Gene3D - 4 95 - -
Bva10g01012 1047 CDD EH 370 436 IPR000261 GO:0005515
Bva10g01012 1047 SUPERFAMILY EF-hand 5 84 IPR011992 -
Bva10g01012 1047 ProSiteProfiles EH domain profile. 5 95 IPR000261 GO:0005515
Bva10g01012 1047 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Bva10g01012 1047 SMART eh_3 359 454 IPR000261 GO:0005515
Bva10g01012 1047 SMART eh_3 1 93 IPR000261 GO:0005515
Bva10g01012 1047 MobiDBLite consensus disorder prediction 474 553 - -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 796 813 - -
Bva10g01012 1047 Pfam EF hand 12 26 IPR002048 GO:0005509
Bva10g01012 1047 SUPERFAMILY EF-hand 355 448 IPR011992 -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 153 174 - -
Bva10g01012 1047 Coils Coil 551 571 - -
Bva10g01012 1047 Gene3D - 360 449 - -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 153 167 - -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 191 287 - -
Bva10g01012 1047 CDD EH 9 75 IPR000261 GO:0005515
Bva10g01012 1047 MobiDBLite consensus disorder prediction 313 361 - -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 774 792 - -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 527 544 - -
Bva10g01012 1047 PANTHER EH DOMAIN 976 1047 - -
Bva10g01012 1047 Coils Coil 586 641 - -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 744 773 - -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 313 365 - -
Bva10g01012 1047 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 976 1047 - -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 744 817 - -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 1025 1047 - -
Bva10g01012 1047 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 1 973 - -
Bva10g01012 1047 ProSiteProfiles EF-hand calcium-binding domain profile. 399 434 IPR002048 GO:0005509
Bva10g01012 1047 Pfam Cytoskeletal-regulatory complex EF hand 360 431 IPR000261 GO:0005515
Bva10g01012 1047 PANTHER EH DOMAIN 1 973 - -
Bva10g01012 1047 MobiDBLite consensus disorder prediction 215 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01012 Bva-Chr10 7422415 7429977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01012 1 1047 EF-hand Containing Proteins AT1G20760 52.351 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01012 K12472 - gmx:100818930 1400.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01012 10 7422415 7429977 Bva10g01012 10 7422415 7429977 ECH