Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01003 ATGAGCAGGAGTTTGGGAATACCAGTGAAGCTACTACACGAGGCCTCGGGTCACGTAGTGACTGTGGAGCTCAAGAGCGGAGAACTCTATCGAGGAAGCATGATCGAGTGCGAAGACAACTGGAACTGTCAACTGGAGAACATTACCTATACTGCCAAGGATGGAAAAACGTCACAACTGGAACATGTTTTCATTCGAGGCAGCAAAGTCAGGTTTATGGTCATACCAGACATGTTGAAGAATGCTCCTATGTTCAAGCGTTTGGATGCTAGAATCAAgGGCAAGGGTGCATCACTTGGAGTTGGTAGGGGCAGAGCAGTTGCAATGAGAGCAAAGGCTCAAGCTGCTGGCCGTGGAGCAGCACCTGGTAGAGGCGTTGTACCACCCGTGCGGAGGTG 398 0.505 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKTSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQAAGRGAAPGRGVVPPVRR 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01003 132 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 128 IPR027141 GO:0006396
Bva10g01003 132 Gene3D - 3 86 - -
Bva10g01003 132 SUPERFAMILY Sm-like ribonucleoproteins 8 123 IPR010920 -
Bva10g01003 132 Pfam LSM domain 11 74 IPR001163 -
Bva10g01003 132 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3 1 128 - -
Bva10g01003 132 CDD Sm_D3 8 77 IPR034099 GO:0000387|GO:0005681
Bva10g01003 132 SMART Sm3 10 75 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01003 Bva-Chr10 7362233 7364564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01003 K11088 - gmx:100305856 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01003 10 7362233 7364564 Bva10g01003 10 7362233 7364564 ECH