Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01000 ATGGgtcatttttttcctatttcatccattttgttATCGATCATCATCTGCTTCGTTGCTTGTTCGCAAGTTATTGTCTTGGTTAATGCCCAAACAGATAATATCACTCAACATTCACTCACCCCAATCAACTACGATCTCTACCATTCTAGTGGTACTCTGATGGAAGAGATCAAGGCTTTGGTCCATCGTCACCTGGATAAACTCACTATGGAGACAATGCAAGCTGGAAATAAAGGCTATAGTGCTGGGGTTACCGTGGTTACTTATTGTCAGGGAAGAGAAGAGACTGATGAGAGGTCAAAGTTTCGCATCCTTCTTAGTTTTGGGCAGCATGGAAGGGAGCTGATTACCTCAGAACTTGCTTTAAGGATTTTGTCTATTCTAAGTGAAGAACAATTTTTACCCAACATGGATCGAGCTTCCTCAAACAGTATGCTTGACAAGCTTGTCATAAAGGTGGTTCCAATGGAAAATTTGAATGGCCGGAAACTTGTTGAAGCGGGAGATCTCTGTGAGAGAAGAAatgGTAGAGGAGTTGATCTCAACAGGAATTGGAGTGTAGATTGGGGGAAGAAGGAGAAGGATTATGATCCATATGAGGAGAATCCCGGAACAGCTCCTTTTAGTGAGCCTGAAACTCAAATCATGCGGAAACTTGCTATATCATTTGATCCACATGTATGGATTAATGTGCACTCAGGAATGGAGGCTCTTTTCATGCCATATGATCATAAAAATACAACCCCTGATGGACTGCCATTGGAGCGGATGAAGTTGTTGCTTGAAGAAGTAAACCACCTTCATTGCCAAAAGCGTTGCATGATTGGATCTGGTGGCGGTTCTGTAGGGTATTTGGCGCATGGAACAGCAACAGATTACATGTATGACATTGCAAGGGTCCCCATGGCTTTCACCTTTGAGATATATGGAGATGGAACAGCCTCATCGAACGATTGTTTTCAAATGTTTAATCCCACTGACCTCTCTAGCTACAATaGAGTCCTCAATGACTGGGCAGCAGCATTCTTTACAATTTTCAAGTTGGGACCATACCAGCTTGGTGAGCTTCCTTCCAAAGCGTCCTTCTCCAAGTTGGATAAGTGGGTATCAATAGATGAATATTTAGATGGGTATTTGATGGAGAGGAGAAATAGATATGGAAAGAAGATGGAGGTGCTTGAACTTGGGATGCAAGAGATAAGAACATATTTCAGGCTCTTCTTGTTATCTTCAGTATTGCTAATGTTCATGTTCTGTTCCAGAATTTCGAAAAGCAAGAGCAGTAGACCAATTGTTTCTGCCATGccccttta 1316 0.4096 MGHFFPISSILLSIIICFVACSQVIVLVNAQTDNITQHSLTPINYDLYHSSGTLMEEIKALVHRHLDKLTMETMQAGNKGYSAGVTVVTYCQGREETDERSKFRILLSFGQHGRELITSELALRILSILSEEQFLPNMDRASSNSMLDKLVIKVVPMENLNGRKLVEAGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGTAPFSEPETQIMRKLAISFDPHVWINVHSGMEALFMPYDHKNTTPDGLPLERMKLLLEEVNHLHCQKRCMIGSGGGSVGYLAHGTATDYMYDIARVPMAFTFEIYGDGTASSNDCFQMFNPTDLSSYNRVLNDWAAAFFTIFKLGPYQLGELPSKASFSKLDKWVSIDEYLDGYLMERRNRYGKKMEVLELGMQEIRTYFRLFLLSSVLLMFMFCSRISKSKSSRPIVSAMPL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01000 438 Gene3D Zn peptidases 43 336 - -
Bva10g01000 438 SMART zn_carb 48 330 IPR000834 GO:0004181|GO:0006508|GO:0008270
Bva10g01000 438 CDD M14-CPA-like 102 324 IPR034269 -
Bva10g01000 438 Pfam Zinc carboxypeptidase 93 328 IPR000834 GO:0004181|GO:0006508|GO:0008270
Bva10g01000 438 PANTHER OS02G0119300 PROTEIN 22 437 - -
Bva10g01000 438 SUPERFAMILY Zn-dependent exopeptidases 44 348 - -
Bva10g01000 438 PANTHER PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B 22 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01000 Bva-Chr10 7345480 7351175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01000 - - gmx:100813842 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01000 10 7345480 7351175 Bva10g01000 10 7345480 7351175 ECH