Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00989 ATGGCTTTCGCCACCTACGCTTTACTTTCTTCAAACTTCGTTGGAAGTAAAGTTCTACTTGCTCCTCCAACCCCCAAAACAAGTAAATCATCAGCTCCTCTGCCATTCTTTCTAAAGAGAAGGTTTATAAATGCTCAAAACATTTTCAACAGAAAGCCTAATCCTGAAGAATTGAAATCCATACCATCCCAAGCAACTTTGGCTGCCTTAATCTTCTCTTCTATCACCCCTCAAGCTCTAGCCGCCGACGTTTCCTCGCCAACCCCTCCCCCGGTAATTGAAGCTCAACCCACCAAACCCAGCCCCTCAAATTCCTCACCCTTCTCTCAGAACCTCCTTCTTACAGCCCCAAAACCCCAAAGTCAGACTTCTGATCTCCCCGAAGGTAACCAATGGCGTTACAGCGAGTTTTTGAATGCAGTGAAGAAGGGCAAGGTCGAGAGAGTGAGGTTCAGCAAAGATGGTTCTGCCCTTCAACTCACCGCCGTCGATGGCCGCCGAGCCACAGTAATTGTACCCAATGACCCAGACCTTATCGACATTTTAGCTATGAACGGTGTCGATATCTCGGTCTCAGAAGGCGATTCGGGTAATgggttgtttaattttattggcaATTTGCTATTCCCATTACTTGCATTTGCCGGATTGTTCTTACTGTTCCGCCGAGCTCAAGGCGGACCTGGTGGGCCTGGAGGGCTTGGCGGACCCATGGATTTCGGAAGATCAAAGTCGAAATTCCAAGAAGTTCCGGAAACTGGTGTGACTTTCGCTGATGTGGCCGGAGCTGACCAAGCGAAATTGGAATTGCAAGAGGTGGTTGATTTCCTGAAAAATCCTGATAAATACACTGCCCTGGGTGCTAAGATTCCCAAAGGATGCCTTCTGGTAGGACCACCGGGTACTGGGAAGACCCTTTTGGCCAGAGCAGTGGCCGGGGAGGCTGGAGTGCCATTCTTTTCATGTGCAGCTTCTGAGTTTGTGGAATTGTTCGTGGGAGTTGGTGCATCTAGAGTGCGGGATTTGTTTGATAAAGCAAAATCAAAGGCTCCATGCATTGTATTTATAGATGAGATTGATGCAGTAGGAAGGCAGAGAGGGGCGGGTCTCGGAGGAGGGAATGATGAAAGGGAACAGACTATTAACCAGCTTTTGACGGAGATGGATGGATTTTCTGGCAATTCCGGTGTCATTGTTTTGGCTGCAACTAACAGACCAGATGTTCTCGATTCAGCATTGCTTAGACCGGGGAGGTTCGACAGACAAGTGACTGTAGACAGACCTGATGTTGCGGGTAGAGTTAAAATTCTTCAGGTTCATTCTAGAGGAAAAGCACTAGCAAAAGATGTggactttgaaaaaattgCAAGAAGAACCCCAGGATTCACGGGAGCTGATTTACAAAATCTGATGAATGAAGCAGCTATACTTGCAGCGAGGCGAGACCTTAAGGAAATAAGTAAAGATGAGATATCTGATGCGCTTGAAAGAATTATTGCTggaccagaaaagaaaaatgctgtAGTCTCAgatgagaagaagaaattagtcGCCTATCATGAGGCTGGTCATGCCTTAGTAGGAGCATTGATGCCCGAATATGATCCTGTAGCCAAGATATCAATCATTCCTCGTGGCCAAGCTGGTGGTCTCACATTTTTTGCTCCCAGTGAAGAGAGGCTTGAATCTGGACTGTACAGTAGAAGCTACTTGGAAAATCAGATGGCAGTTGCTTTGGGTGGAAGGGTTGCTGAAGAGGTCATTTTTGGCGAGGAGAATGTCACCACTGGAGCTTCAAATGATTTCATGCAAGTTTCACGAGTGGCAAGGCAGATGGTGGAGAGATTTGGATTCAGCAAGAAAATTGGACAAGTTGCCATTGGTGGACCTGGTGGAAATCCATTCTTGGGCCAACAGATGTCAACGCAGAAAGATTACTCCATGGCTACAGCTGATATAGTGGATGCAGAGGTTAGGGAGCTGGTAGAAAGAGCCTACACAAGGGCAAAGCAAATTACTACAACCCACATTGACATCCTTCACAAGCTTGCTCAGCTTCTCATAGAAAAAGAGACGGTAGATGGTGAAGAGTTCATGAGCCTATTTATTGATGGAAAAGCTGAATTGTATGTAGCGTA 2138 0.4504 MAFATYALLSSNFVGSKVLLAPPTPKTSKSSAPLPFFLKRRFINAQNIFNRKPNPEELKSIPSQATLAALIFSSITPQALAADVSSPTPPPVIEAQPTKPSPSNSSPFSQNLLLTAPKPQSQTSDLPEGNQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVPNDPDLIDILAMNGVDISVSEGDSGNGLFNFIGNLLFPLLAFAGLFLLFRRAQGGPGGPGGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFDKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSTQKDYSMATADIVDAEVRELVERAYTRAKQITTTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYVA 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00989 712 ProSitePatterns AAA-protein family signature. 397 415 IPR003960 GO:0005524|GO:0016887
Bva10g00989 712 Gene3D Peptidase M41 504 707 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Bva10g00989 712 Pfam ATPase family associated with various cellular activities (AAA) 295 426 IPR003959 GO:0005524|GO:0016887
Bva10g00989 712 Gene3D - 428 503 - -
Bva10g00989 712 PANTHER METALLOPROTEASE M41 FTSH 59 704 - -
Bva10g00989 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 254 498 IPR027417 -
Bva10g00989 712 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 17 712 IPR005936 GO:0004176|GO:0004222|GO:0016020
Bva10g00989 712 MobiDBLite consensus disorder prediction 82 112 - -
Bva10g00989 712 Pfam AAA+ lid domain 449 492 IPR041569 -
Bva10g00989 712 SUPERFAMILY FtsH protease domain-like 508 702 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Bva10g00989 712 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED 59 704 - -
Bva10g00989 712 SMART AAA_5 290 429 IPR003593 -
Bva10g00989 712 Gene3D - 126 197 - -
Bva10g00989 712 MobiDBLite consensus disorder prediction 98 112 - -
Bva10g00989 712 Pfam Peptidase family M41 508 701 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Bva10g00989 712 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 201 701 IPR005936 GO:0004176|GO:0004222|GO:0016020
Bva10g00989 712 CDD AAA 261 426 - -
Bva10g00989 712 Gene3D - 245 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00989 Bva-Chr10 7286253 7289661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00989 250 703 Miscellaneous Gene Families AT5G53170 49.670 1.58e-135 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00989 K03798 - zju:112488754 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00989 10 7286253 7289661 Bva10g00989 10 7286253 7289661 ECH