Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00988 atgaaatcaaaattcaagagTGTTTGCGTGTTCTGTGGAAGCAGTACAGGCAACAGAACTTGCTACAGGGAAGCTGCCATTCAACTTGGCCGAGAGCTGgtCTCTAGGAGTCTGGATCTTGTTTATGGAGGAGGAAGTGTTGGGCTAATGGGTCTTGTTTCCCAAGAAGTGCATCTTGGCGGCGGACATGTTCTCGGAATCATTCCCAAAACTCTTATGCGCCGAGAGATTACCGGGGAAACAATGGGGGAGGTCAGGGCTGTGGCTAGCATGCACCAAAGAAAAGCCGAGATGGCACGCCATTCTGACTGTTTCATCGCACTTCCAGgtggGTATGGAACCTTGGAAGAGTTACTGGAAGTCGTAACATGGGCCCAGCTCGGAATCCATGACAAACCAGTGGGTCTGCTGAATGTTGAAGGATACTACAATCACCTCCTCACCTTCATAGACAAAGCAGTGGAGGATGGTTTTATCAAGCCTTCTCAGCGCACTATTTTTGTCTCTGCTCCAAACGCAGCGGAACTTGTTGAGAAATTAGAggaATACGAGCCTCTGCACCATGGAATAGTGTCTAAGGCCAAATGGGAGGAAGAGCAAGTGGAGCTGAATTCTTATTTGCAGATTGATATGGCTCGCTA 641 0.4665 MKSKFKSVCVFCGSSTGNRTCYREAAIQLGRELVSRSLDLVYGGGSVGLMGLVSQEVHLGGGHVLGIIPKTLMRREITGETMGEVRAVASMHQRKAEMARHSDCFIALPGGYGTLEELLEVVTWAQLGIHDKPVGLLNVEGYYNHLLTFIDKAVEDGFIKPSQRTIFVSAPNAAELVEKLEEYEPLHHGIVSKAKWEEEQVELNSYLQIDMAR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00988 213 SUPERFAMILY MCP/YpsA-like 4 183 - -
Bva10g00988 213 Gene3D - 1 182 - -
Bva10g00988 213 TIGRFAM TIGR00730: TIGR00730 family protein 6 183 IPR005269 GO:0009691|GO:0016787
Bva10g00988 213 PANTHER LOG FAMILY PROTEIN YJL055W 2 213 - -
Bva10g00988 213 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 2 213 - -
Bva10g00988 213 Pfam Possible lysine decarboxylase 50 180 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00988 Bva-Chr10 7283337 7285014 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00988 K22522 - vvi:100255687 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00988 10 7283337 7285014 Bva10g00988 10 7283337 7285014 ECH