Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00982 ATGACTGGCAAAATGCACCGCCCAACGCCTCTTATTATCGCTTTGGTCTTAATCTGTGGTTGTACTTGGATAGAAGTCACCCATGGCGAGTACTTAATCGGACTGGGAAGCTATGACATGACGGGTCCCGCTGCTGATGTGAACATGATGGGTTATGCCAACATTAAGCAGAACGCAGCTGGAATTCACTTTCGCCTAAGAGCTAGAACATTCATCGTGGCTCAGACTCTTCAAGGTCCTAGGTTTGTTTTTGTCAATCTTGATGCGGGGATGGCATCGCAGCTTGTGACTATTAAAGTGCTTCAGAGACTTAACTCAAGGTTCGAAAGTCTATACACCCAAGAAAACGTGGCAATCAGTGGGATTCATACACATGCTGGTCCCGGTGGTTATCTACAATACTTGGTTTACACTGTGACTTCTCTGGGATTCGTACAACAATCTTTCGATGCCATTGTTGACGCAATAGAACAGAGCATTATTCAAGCGCACCAAAACCTTAAGCCCGGTTCCATTTTTATCAACAAAGGCGACGTAAAGGATGCCGGAATAAACAGGAGCCCAAGTGCTTATTTGCAAAACCCAGCGGAGGAGAGAGCTAAATATCCTACCAACGTTGACACAGAAATGACACTTCTCAAATTTGTGGATGGTGCAAGTAATAAAAGCATAGGAGCATTCAGCTGGTTTGCGACGCACGGCACCTCTATGAGCAGAGACAACAAGCTTATTAGCGGGGACAACAAGGGTGTTGCTGCTAGGCTCTTTGAGGATTGGTTTTCTTCTCAAAGCAAACCTTCTTTCCCAACTATCAATAACTCTAATATTGACCAGTTGGTGACAAAAGCACAAGCAATTAAAGCCACGGGAGGCAAAGCTTGCGTTAAAGAAACTAGCCAAACATCTAAGGTAAGGAAAAATAATGGGTCTTTATTCGTTGGAGCATTTTGCCAATCAAATGTGGGAGATGTCACCCCAAATGTGCTCGGAGCATTTTGCATCGACAGTGGAAAACCCTGTGACTTCAATCGCTCCTCGTGCAATGGAAATGACCAGCTCTGTATAGGCAGGGGACCAGGCTACCCAGATGAAATATTAAGTACCAAGATCATAGGTGAGAGGCAGCTTAAAACTGCTGTGGATCTGTTCACGTCAGCTTCGAAAGAATTGACCGGGAAGATCGATTATCGCCATGTTTACCTGAATTTTACTGATATTGATGTTAAGTTGGAGAGCAACAAGGTCGTCAAAACTTGTCCTGCAGCACTTGGTCCTGGTTTTGCAGCTGGCACAACAGATGGGCCTGGTGCGTTTGGGTTTCAACAAGGTGATACAGAGATTAGTCCGTTCTGGAAAATTGCTAGAGATTTTCTGAAAGAACCAACAGATTATCAAGTAGAGTGCCAAAAGCCGAAGCCAGTTTTGCTGAGCACTGGTGAAATGTTTGAACCTTATGCATGGGCGCCTGCAATTCTTCCAATCCAGATTCTGAGGCTGGGAAAACTGATCATTCTTTCTGTACCAGGAGAGTTCACAACAATGGCGGGCCGAAGACTGAGGGAGGCAGTCAAGGAGACATTAATAAGTAGTAGTAAAGGAGAATTCGGTGAGGAAACACACGTTGTTATTGCAGGCCTCACAAATACATACTCACAGTACGTTGCAACTTTTGAAGAATACCAGCACCAGCGGTATGAGGCAGCTTCAACGCTCTACGGTCCTCACACATTGTCAACATACATTCAAGAATATAAGAAACTAGCAGAAGCAATGGCTACTGGTCAGAAAATTACTGGACAAGGTGCTTCACCACCAGATCTTTCTTCCGTACAACTTAAACTCTTACCTGGGCCATTCATAGACTCACCTCCAGATGGTATAAATTTTGGCGATGTGAAGGATGACATTGCTATTCCAAAAGGGGGCTATTTTACAAAGGGAGATAGACCAACCGCTACATTCTGGAGCTCCAATCCAAGATATGATCTCTTGACAGAAGGCACATTTGCAGTGGTAGAGAGGCTTGAGGAGGAAAAGTGGATTCCCGTTTATGATGACGACGATTTAAGCTTATTTTTCAAGTGGAATATAGACAATAGTTCCTCGCATGGCTTAGCAAGTGTAGAATGGGAAATACCAAAGGACGCTATTTCGGGAGTATACAGAGTCCGACACTTTGGTTCGACGAGGAAATTTCTTGTCCCCACCAACCAATACTTCACTGGTGCATCGAGTGCATTTGCAGTTGCAGTACTGTA 2258 0.4451 MTGKMHRPTPLIIALVLICGCTWIEVTHGEYLIGLGSYDMTGPAADVNMMGYANIKQNAAGIHFRLRARTFIVAQTLQGPRFVFVNLDAGMASQLVTIKVLQRLNSRFESLYTQENVAISGIHTHAGPGGYLQYLVYTVTSLGFVQQSFDAIVDAIEQSIIQAHQNLKPGSIFINKGDVKDAGINRSPSAYLQNPAEERAKYPTNVDTEMTLLKFVDGASNKSIGAFSWFATHGTSMSRDNKLISGDNKGVAARLFEDWFSSQSKPSFPTINNSNIDQLVTKAQAIKATGGKACVKETSQTSKVRKNNGSLFVGAFCQSNVGDVTPNVLGAFCIDSGKPCDFNRSSCNGNDQLCIGRGPGYPDEILSTKIIGERQLKTAVDLFTSASKELTGKIDYRHVYLNFTDIDVKLESNKVVKTCPAALGPGFAAGTTDGPGAFGFQQGDTEISPFWKIARDFLKEPTDYQVECQKPKPVLLSTGEMFEPYAWAPAILPIQILRLGKLIILSVPGEFTTMAGRRLREAVKETLISSSKGEFGEETHVVIAGLTNTYSQYVATFEEYQHQRYEAASTLYGPHTLSTYIQEYKKLAEAMATGQKITGQGASPPDLSSVQLKLLPGPFIDSPPDGINFGDVKDDIAIPKGGYFTKGDRPTATFWSSNPRYDLLTEGTFAVVERLEEEKWIPVYDDDDLSLFFKWNIDNSSSHGLASVEWEIPKDAISGVYRVRHFGSTRKFLVPTNQYFTGASSAFAVAVL 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00982 752 PANTHER CERAMIDASE 15 749 IPR006823 GO:0017040|GO:0046514
Bva10g00982 752 Pfam Neutral/alkaline non-lysosomal ceramidase, C-terminal 584 749 IPR031331 -
Bva10g00982 752 Pfam Neutral/alkaline non-lysosomal ceramidase, N-terminal 31 582 IPR031329 -
Bva10g00982 752 Gene3D - 618 751 IPR038445 -
Bva10g00982 752 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Bva10g00982 752 PANTHER NEUTRAL CERAMIDASE 15 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00982 Bva-Chr10 7258960 7262158 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00982 K12349 - gmx:100793262 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00982 10 7258960 7262158 Bva10g00982 10 7258960 7262158 ECH