Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00973 ATGGCCATGGAAGCCATAAGCTCGTCTGCTATCATTTTATCTTCGTCTTCTTTTTCTAGGTCGATCTTCTCTCCGAGGGTTACTGACTCTCCAAAATTCGTCCGTTTGCACATCTGTTCCAAAAAAAATAATGGCGATTCCGATCTCCAATCGGACTCGAACAGTACCAGCATCGTGCCCCTCTTCAGTAATAAGACTCTGTCGAAGGACGAGGCAATGGGACTGGTGCTAGGTGCAGCGTCCGGGAGAGGATGGGGTATGGAAGGCCCACCGGTTGCTGCTGGCAAAGAGGATGGATCTGGTACAGAAAAGATTTTGACCTTCCCTTGGTCGCTTTTCGCCAAATCACCGCGTAGGCGAATGCGAGTTGCCTTCACTTGCAACATTTGTGGCCAGAGAACCACTCGGGCAATCAATCCTCATGCTTATAGGGATGGAACAGTTTTTGTCCAGGTGAAGTGCTACGTGAACCAGAGCTTCAATTACAGAGATACTAGCTGGAATATGGGCTCTAAGCATGAGTTGGATGATGATGCTGATGTCTTCCCGTATAATAAGCTGAATTG 566 0.4806 MAMEAISSSAIILSSSSFSRSIFSPRVTDSPKFVRLHICSKKNNGDSDLQSDSNSTSIVPLFSNKTLSKDEAMGLVLGAASGRGWGMEGPPVAAGKEDGSGTEKILTFPWSLFAKSPRRRMRVAFTCNICGQRTTRAINPHAYRDGTVFVQVKCYVNQSFNYRDTSWNMGSKHELDDDADVFPYNKLN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00973 188 Pfam DNL zinc finger 123 152 IPR007853 GO:0008270
Bva10g00973 188 ProSiteProfiles Zinc finger DNL-type profile. 116 188 IPR007853 GO:0008270
Bva10g00973 188 PANTHER A_TM021B04.14 PROTEIN 3 152 - -
Bva10g00973 188 PANTHER UNCHARACTERIZED 3 152 IPR024158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00973 Bva-Chr10 7186420 7187572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00973 K17808 - cpap:110818225 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00973 10 7186420 7187572 Bva10g00973 10 7186420 7187572 ECH