Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00972 ATGGCAACCGTCACCTCTGCTTCCGTTGCAATTCCATCATTCACCGGCCTTAAGGTAACTGGCACAGCCTCAGCCAAAGTCAATGCCACTACAAAGGTGTCTGCTTCCCCATTGCCAAAGCTCACCGTCAAGTCTTCACTTAGAGATGTTGGCGTTGCTGTTGTCGCCACGGCTGCAAGCGCAATGCTAGCCAGCAATGCCATGGCCGTTGAGATCTTGCTTGGCGGTGATGATGGATCTCTTGCTTTCGTTCCCAATGCTTTCTCCGTGAGCTCAGGAGAGAAAATCGTATTCAAGAACAACGCTGGTTTCCCGCACAACGTTGTCTTCGACGAGGACGAGATCCCCGGCGGTGTTGATGCGTCAAAGATCTCCATGTCCGAAGAAGACCTTCTCAATGCCCCCGGAGAGACTTACAGCGTTACCTTGAGTGAAAAAGGAACCTACAGTTTCTACTGTTCCCCTCACCAAGGAGCTGGTATGGTCGGAAAAGTAACTGTGAATTA 506 0.5099 MATVTSASVAIPSFTGLKVTGTASAKVNATTKVSASPLPKLTVKSSLRDVGVAVVATAASAMLASNAMAVEILLGGDDGSLAFVPNAFSVSSGEKIVFKNNAGFPHNVVFDEDEIPGGVDASKISMSEEDLLNAPGETYSVTLSEKGTYSFYCSPHQGAGMVGKVTVN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00972 168 ProSitePatterns Type-1 copper (blue) proteins signature. 147 161 IPR028871 -
Bva10g00972 168 TIGRFAM cyanin_plasto: plastocyanin 70 168 IPR002387 GO:0005507|GO:0009055
Bva10g00972 168 Pfam Copper binding proteins, plastocyanin/azurin family 71 168 IPR000923 GO:0005507|GO:0009055
Bva10g00972 168 PRINTS Plastocyanin signature 98 116 IPR002387 GO:0005507|GO:0009055
Bva10g00972 168 PRINTS Plastocyanin signature 75 94 IPR002387 GO:0005507|GO:0009055
Bva10g00972 168 PRINTS Plastocyanin signature 147 166 IPR002387 GO:0005507|GO:0009055
Bva10g00972 168 PANTHER PLASTOCYANIN 1 168 - -
Bva10g00972 168 PRINTS Type I copper blue protein family signature 145 159 IPR001235 GO:0005507|GO:0009055
Bva10g00972 168 PRINTS Type I copper blue protein family signature 89 102 IPR001235 GO:0005507|GO:0009055
Bva10g00972 168 PRINTS Type I copper blue protein family signature 104 119 IPR001235 GO:0005507|GO:0009055
Bva10g00972 168 Gene3D - 70 168 IPR008972 -
Bva10g00972 168 PANTHER PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED 1 168 - -
Bva10g00972 168 CDD Plastocyanin 70 168 IPR002387 GO:0005507|GO:0009055
Bva10g00972 168 SUPERFAMILY Cupredoxins 67 168 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00972 Bva-Chr10 7183887 7185028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00972 K02638 - pvy:116123897 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00972 10 7183887 7185028 Bva10g00972 10 7183887 7185028 ECH