Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00970 ATGGACAAGCTGTATGGATTGAGCCACCTCTTCATGACATTCTTTCTTCATAATTTCTCGTCATTCATGGTGATACCTGCCATCACCGATGTCACAATGGCTGCTCTTTGCCCTGGACAAGATGAATGCTCACTTGCCATTTATCTCACTGGTTTTCAGCAAGCGATCATAGGATTGGGAACACTTGTGATGACGCCTCTGTTGGGAAATTTATCAGATAAGTATGGCAGGAAGACTATTCTTACGGTTCCATTGAGTCTCATTATAATTCCCTTAGGCATATTAGCTTATAGCAGGTCCAGAACATTCTTCTTTGTGTATTATGTGTCGAAGACTCTCATTGCCATGGTCTGCGAAGGAAGTGTGCCATGCCTCGCTCTAGCTTATGTGGCAGATAATGTTCGAGAAGGGCGTCGAGCTACTGCATTTGGAATCCTTTCAGGGATCGGATCCGCCGCGTTCGTGTGCGGAACCTTGTCCACTCGGTTTCTATCTACTGCCCTAACTTTCCAGGTTTCGACTCTAGTTGCATTGATAGCAGCGTTGTATATGAGGGTTTTCCTTCGGGATCCAGTCATCGGTGATAATCTTTCTGTTCCGATTCTTTCACAAGGAAAACCCAGGACACCTAAAATTGATGAACAATCCAAAAGAAATACGCCGCTCTTTAAGACAATGCCTTCTTTCGAGGATCTAACCTGCTTGCTCAAAAGCAGCTTGACTGTTACCCAAGCAGCAATCGTTGCATTCTTCAGCAATCTTGCAGATGTGGGCCTTCATGGTTCGGTGGCGTATTTCTTAAAGGCGCAGTTTCATTTTGACAAGAATCAGTTTGCTGACTTGATGGTCATTGCCGGGATTGCGGGGACTGTGTCACAGCTTCTTCTTATGCCCATTTTGGCTCCTGCTCTGGGAGAGGCAAGGCTGCTTTCAATTGGACTCTTCTTTAACTGCGCACATGTGTTTGTTTACAGTATAGCATGGTCCTCCTGGGTACCTTATGCTGCTGCCATGTTCTCCATTTTGAGTGTTTTCTCACAGCCATGTTTGCGGAGCATTGTATCTAAACAAGTTGGTCCCTGTGAGCAGGGTAAGGCACAAGGTTGCATTTCAGGCATATGTTCATTTGCACATGTCGTTTCCCCTTTGGCTTTCTCTCCTCTGACAGCTCTTTTCCTGTCTGAAAGGGCACCTTTTAATTTTCCTGGCTTCAGTATAATGTGCATTGGATTTGCTTCGATGATATCCTTTGTTCAGAGTACAATGATTAGAGTGCCTCCTGCTATATCTAATCAGACAGACAGAAATTGCTTGGAGCCCTA 1322 0.4501 MDKLYGLSHLFMTFFLHNFSSFMVIPAITDVTMAALCPGQDECSLAIYLTGFQQAIIGLGTLVMTPLLGNLSDKYGRKTILTVPLSLIIIPLGILAYSRSRTFFFVYYVSKTLIAMVCEGSVPCLALAYVADNVREGRRATAFGILSGIGSAAFVCGTLSTRFLSTALTFQVSTLVALIAALYMRVFLRDPVIGDNLSVPILSQGKPRTPKIDEQSKRNTPLFKTMPSFEDLTCLLKSSLTVTQAAIVAFFSNLADVGLHGSVAYFLKAQFHFDKNQFADLMVIAGIAGTVSQLLLMPILAPALGEARLLSIGLFFNCAHVFVYSIAWSSWVPYAAAMFSILSVFSQPCLRSIVSKQVGPCEQGKAQGCISGICSFAHVVSPLAFSPLTALFLSERAPFNFPGFSIMCIGFASMISFVQSTMIRVPPAISNQTDRNCLEP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00970 440 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 192 IPR020846 GO:0022857
Bva10g00970 440 PANTHER TETRACYCLINE RESISTANCE PROTEIN, CLASS A-LIKE 6 433 - -
Bva10g00970 440 Gene3D MFS general substrate transporter like domains 7 420 IPR036259 -
Bva10g00970 440 Pfam Major Facilitator Superfamily 10 382 IPR011701 GO:0022857|GO:0055085
Bva10g00970 440 SUPERFAMILY MFS general substrate transporter 10 415 IPR036259 -
Bva10g00970 440 CDD MFS_SLC46_TetA_like 10 420 - -
Bva10g00970 440 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 6 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00970 Bva-Chr10 7174436 7182743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00970 2 439 Organic Solute Cotransporters AT2G16990 44.690 2.33e-119 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00970 - - gmx:100789917 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00970 10 7174436 7182743 Bva10g00970 10 7174436 7182743 ECH