Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00966 ATGGCGAAGGTAAAGTATGGAAGGATACAGGGGAAGAAATGGTCGACTTTCACACTGGTTTTATCCATGCTTTTCATGCTCAGCGTCGTCCTTCTAATGCTCCTCGCCCTCGGAATGGTTTCCCTTCCGATTAGTACCGACGATTCTCCGCCCACTGATCTCAGTGCCTTCAGGCGCAAAACCGTTGAAAGAGGTGACGGTTTGGGAGAAAGAAGCGGGCAGTGGACCCAGGTTCTCTCTTGGGAGCCTAGAGCTTTCATATATCACAATTTCCTGTCCAAAGAAGAATGTGAATACTTGATCAGTCTTGCCAAACCTTATATGGTTAAATCAACTGTTGTTGATAGCAAGACTGGACAGAGTAAAGATAGCAGAGTGCGAACTAGTTCTGGAATGTTTTTGAGGAGAGGACGGGATAAAATTATCCGAGATattgagaaaagaatagcTGACTTTACCTTCATACCTGTAGAGAACGGAGAAGGACTTCAGATTCTCCACTATGAAGTTGGGCAAAAGTATGAGCCTCATTATGATTACTTCCTTGATGAGTTCAACACTAAGAATGGAGGTCAACGGATTGCCACTCTTCTTATGTATCTGTCAGATGTTGAAGAAGGAGGCGAGACAGTTTTTCCTGCTGCCAAGATTAGTTTTAGTTCTGTACCATGGTGGAATGAATTATCTGAATGCGGTAGAAAGGGTCTTTCTGTGAAACCAAAAATGGGTGATGCACTGCTTTTTTGGAGTGTGAGACCAGATTCCACGCTAGACCCTTCGAGTTTACATGGTGGTTGCCCAGTTATTAGAGGAAACAAATGGTCTTCAACAAAGTGGATGCATCTTGAGGAGTACAAGGTCTA 863 0.4322 MAKVKYGRIQGKKWSTFTLVLSMLFMLSVVLLMLLALGMVSLPISTDDSPPTDLSAFRRKTVERGDGLGERSGQWTQVLSWEPRAFIYHNFLSKEECEYLISLAKPYMVKSTVVDSKTGQSKDSRVRTSSGMFLRRGRDKIIRDIEKRIADFTFIPVENGEGLQILHYEVGQKYEPHYDYFLDEFNTKNGGQRIATLLMYLSDVEEGGETVFPAAKISFSSVPWWNELSECGRKGLSVKPKMGDALLFWSVRPDSTLDPSSLHGGCPVIRGNKWSSTKWMHLEEYKV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00966 287 SMART p4hc 83 281 IPR006620 GO:0005506|GO:0016705|GO:0031418
Bva10g00966 287 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 1 287 IPR045054 -
Bva10g00966 287 Pfam 2OG-Fe(II) oxygenase superfamily 163 281 IPR044862 -
Bva10g00966 287 Gene3D q2cbj1_9rhob like domain 76 282 - -
Bva10g00966 287 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 159 282 IPR005123 -
Bva10g00966 287 PANTHER PROLYL 4-HYDROXYLASE 3-RELATED 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00966 Bva-Chr10 7155903 7161045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00966 K00472 - qsu:111988198 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00966 10 7155903 7161045 Bva10g00966 10 7155903 7161045 ECH