Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00962 ATGAGGACGGAGATGAAACATGGAACTCAACCGCTGGTGAACGGTAACTCTGAGGACTTCTCAAGCTCTAGATTTTCATCTCTGCTAGCCACAAAAGACCgtgattttcttctctctccaaCTGGGGCTCAGGTGAAAGTTTCTGACCTTGAAGGCAAAGTTGTGGGTCTCTTATTCGCTGCCAACTGGTACCCACCATGCCGGAGCTTCACCCAAATGTTAGCTGGTATGTACGATGAGCTTAAGCGCAATGTCAGAGACTTCGAGATTGTCTATGTATCCTCAGACGAAGACGTCGATGCCTTTAATGGCTTCTACGGACACATGCCATGGCTTGCAGTTCCGTTCTCTGATttggaaacaaagaaatcatTGAGCAGAAAGTATGATGTTGAAGGTATTCCTTGCTTGATTATATTGCAACCTCGCGATAATAAAGAGGATGCTACGCTGCGTGATGGAGTTGAACTCATTTATCGCTATGGAGTCCAAGCTTATCCATTTACTAGCCAGAGGTTGGAGCAGCTTCACAGGGAAAATAGAGAGAGGCATGAGAACCAGACCTTAACTAATTTACTAACAAACCACAATAGACACTATGTTTTGGGTCACCCGGGCCTCCAACAGGTACCTGTTACTTCTTTAATGGGTAAAACAATTGGACTCTATTTCTCAGCCCAATGGTGCGTGCCATGCGTGAAATTCACTCCCAAACTGATCTCAATCTACCATAAGATAAAGCAGATGTTGGCTACAAATGGAAATGACGAGGAATTTGAAATTGTGCTAGTCTCTAGTGACCGTGACCAAGCATCTTTTGACTCTTACTTCAGTAGCATGCCTTGGTTGGCATTGCCATTTGGGGACCCAGAGATTAAGAACCTTGTGAGGCATTTTGATGTGCAAGGCATACCATGCTTGGTGATTTTGGGCCCTGATGGAAAAACAATAACAAGACATGGTAGGAACTTGATAAACTTGTACCAGGAAAATGCTTACCCTTTCACTGACGCCAAGGTGAAGCAACTAGAGAAACAATTAGAAGAGGAGGCTAAAGTGCTCCCTAGTGTGGTATATCACGCCGAGCATCGCCACCGCCTGAATTTGGTATCAGATGGGAATGGAGGAGGGCCCTTTATCTGCTGTGTCTGCGATGAACAAGGCTCCAGCTGGGCCTACCAATGTCTCGAATGTGGTTACGAAGCGCACCCAAAGTGTGTCAGAGCTGTGAATCGTGACTCAATCCCAGTCACTAGTTA 1259 0.4448 MRTEMKHGTQPLVNGNSEDFSSSRFSSLLATKDRDFLLSPTGAQVKVSDLEGKVVGLLFAANWYPPCRSFTQMLAGMYDELKRNVRDFEIVYVSSDEDVDAFNGFYGHMPWLAVPFSDLETKKSLSRKYDVEGIPCLIILQPRDNKEDATLRDGVELIYRYGVQAYPFTSQRLEQLHRENRERHENQTLTNLLTNHNRHYVLGHPGLQQVPVTSLMGKTIGLYFSAQWCVPCVKFTPKLISIYHKIKQMLATNGNDEEFEIVLVSSDRDQASFDSYFSSMPWLALPFGDPEIKNLVRHFDVQGIPCLVILGPDGKTITRHGRNLINLYQENAYPFTDAKVKQLEKQLEEEAKVLPSVVYHAEHRHRLNLVSDGNGGGPFICCVCDEQGSSWAYQCLECGYEAHPKCVRAVNRDSIPVTS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00962 419 Pfam C1 domain 363 407 IPR004146 -
Bva10g00962 419 PANTHER THIOREDOXIN 148 406 - -
Bva10g00962 419 PANTHER THIOREDOXIN 22 143 - -
Bva10g00962 419 SMART c1_12 363 412 IPR002219 -
Bva10g00962 419 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 364 414 IPR002219 -
Bva10g00962 419 Gene3D Glutaredoxin 196 337 - -
Bva10g00962 419 Gene3D Glutaredoxin 28 169 - -
Bva10g00962 419 ProSiteProfiles Thioredoxin domain profile. 27 160 IPR013766 -
Bva10g00962 419 SUPERFAMILY Thioredoxin-like 38 143 IPR036249 -
Bva10g00962 419 CDD TryX_like_TryX_NRX 200 335 IPR045870 GO:0004791
Bva10g00962 419 Pfam Thioredoxin-like 52 143 IPR012336 -
Bva10g00962 419 Pfam Thioredoxin-like 217 315 IPR012336 -
Bva10g00962 419 MobiDBLite consensus disorder prediction 1 21 - -
Bva10g00962 419 SUPERFAMILY Cysteine-rich domain 351 408 IPR046349 -
Bva10g00962 419 SUPERFAMILY Thioredoxin-like 207 320 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00962 Bva-Chr10 7133436 7137201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00962 K17609 - gmx:100815038 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00962 10 7133436 7137201 Bva10g00962 10 7133436 7137201 ECH