Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00944 ATGGCAGTATCTCATGCTGAAAGACAAGAGATCGACTGCATTAATCTTCTTCCACAGAATGAGAAACTAAGACATGCTCTGCAAGatcaaaaaaatgaacaagtgGCAACCCTTTTTAGCTATCTTGAACCAAAATCAATGAGATTGATCAGGCAAAAAGATGAAGATTTAGCACAAGCTACAAGGAAGACTATAGAGCTCGAGGATCACTTGAAAAATGCAGAAATCGAGAGCGAAGCATGGCAAAGATTAGCCAAGGAAAACGAAGCCATGGTTGAAAAACTGAGCAACACGCTTGAGCAGGTAAGAGAGAGAATGGTTATGGTTAGCAACAGAGGTGAAGACACTGAGTCGTGCTATGTTCCTTGTGAGAGAGGAGAtgaaaaagaggaagagatgGAGAGTCAAAGGAAGAGGATGGCTTGTAAAAGCTGTAACTCTCGGAGCTCATGCCTAGTGTTTCTACCTTGCAGACACCTCTGCTGCTGCTATTTCTGTGAAGCTTTGCTTGATGTTTGCCCAGTATGTAAATCTGCAAAAGAGGATTCAATAGAGGTGTTCCTATCCTA 569 0.3989 MAVSHAERQEIDCINLLPQNEKLRHALQDQKNEQVATLFSYLEPKSMRLIRQKDEDLAQATRKTIELEDHLKNAEIESEAWQRLAKENEAMVEKLSNTLEQVRERMVMVSNRGEDTESCYVPCERGDEKEEEMESQRKRMACKSCNSRSSCLVFLPCRHLCCCYFCEALLDVCPVCKSAKEDSIEVFLS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00944 189 Coils Coil 57 112 - -
Bva10g00944 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 189 IPR013083 -
Bva10g00944 189 PIRSF SBP1_RNase_bind 2 189 IPR017066 -
Bva10g00944 189 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 5 188 IPR017066 -
Bva10g00944 189 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED 5 188 - -
Bva10g00944 189 Pfam Zinc finger, C3HC4 type (RING finger) 140 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00944 Bva-Chr10 7048747 7051181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00944 129 189 Miscellaneous Gene Families AT4G39050 36.923 7.62e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00944 K19042 - pvy:116141833 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00944 10 7048747 7051181 Bva10g00944 10 7048747 7051181 ECH