Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00920 ATGAAGGGAGGTAAGAGGCCGATCCACGCGGTGGCCACATGGGTTCGCCGTCAACCGCCCAAGATGAAGGCGCTTCTCGCAGTCTTTTCGGGCCTCGTGGCCTTGCTCTTTCTCAGAATGGTCGTTCAAGATCACGACAAACTCTTCGTCGCAGCAGAGGCTGTTCACGCATTAGGAATATCCGTACTCATTTACAAGCTCACTAAGGAAAAAACTTGTGCTGGGCTTTCGCTTAAATCGCAGGAGCTGACAGCTTTGTTCTTAGCTGTTAGACTTTATTGCAGTTTTGTTATGGAATTTGATATACATACCCTACTTGATTCAGCAACGCTGGGAACAACCCTTTGGGTCATCTATATGATAcgttttaaattgaaatccAGTTACATGGATGATAAGgacaattttgaaatatattatgtgGTGATACCTTGTGCTCTGTTGTCATTATTTATTCATCCCACAACCCACCATCATCTTGTGAACAGGATTTTGTGGGCTTTCTGTGTTTATCTTGAAGCTGTGTCTGTACTCCCCCAACTGCGGGTCATGCAGAACACTAAGATTGTTGAGCCTTTCACTGCACATTATGTTTTCGCCCTTGGAGTTGCAAGGTTCTTGAGCTGTGCACATTGGGTCCTTCAGGTATTAGACACTCGAGGGCGCCTACTAACGGCTTTGGGTTATGGATTGTGGCCTTCTATGGTACTCCTGTCAGAAATTGTCCAGACTTTCATCCTGGCAGATTTCTGCTACTACTATGTCAAGAGCCTCGTTGGTGGACAACTTGTTCTTCGGCTTCCTTCAGGAGTcgtata 818 0.4401 MKGGKRPIHAVATWVRRQPPKMKALLAVFSGLVALLFLRMVVQDHDKLFVAAEAVHALGISVLIYKLTKEKTCAGLSLKSQELTALFLAVRLYCSFVMEFDIHTLLDSATLGTTLWVIYMIRFKLKSSYMDDKDNFEIYYVVIPCALLSLFIHPTTHHHLVNRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00920 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva10g00920 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva10g00920 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva10g00920 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva10g00920 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva10g00920 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva10g00920 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Bva10g00920 272 PANTHER LUMEN PROTEIN RETAINING RECEPTOR, PUTATIVE-RELATED 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00920 Bva-Chr10 6936106 6939341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00920 5 272 Miscellaneous Gene Families AT4G38790 81.716 2.39e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00920 - K10949 gmx:100787747 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00920 10 6936106 6939341 Bva10g00920 10 6936106 6939341 ECH