Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00875 ATGGGGGCTCTTGCTACATTCGCTCCATGGACTCCCGAAGACGACCTTCTGCTTAAGAACGCGGTTGAGGCTGGTGCTTCCTTAGAGTCCCTTGCGAAAGGTGCTGTGCAATTCTCTCGAAGATTTTCTGTTCGAGAAATACAAGATCGTTGGTATTCTCTCCTTTATGATCCTATTATTTCTGCTGAAGCGTCTGCATGCATGAGTAACTTTGAGCTGTCCATTTCATCTCACCCATCAAAGTTCAGTAAAATTGGACagtcaaaagaaatcaaacttaACTCTGTTAAGAGAAAAGCTGAAAGTGTTCGCAGTTCTTACTATGCTATGCGTAAAAGAATCtgcaataatataattacttcTATGGACTTAAGTTTTCTTGCTCCGCCTGCAAATAGcaattatttagaaaatggAGCTGAGCCTTTACCTGAAAACTGCATGCCTGAAGGTGCCCCCTTGGATAATTTTGGTTTCAAGGGATCAAATTTTGATCCTATGCATTGTGCTTTGCCTGAAAATATGATGGATCCTAGTGAAGCTACTAATGGAGTTACTTCCCATGCCTTTTACACTGGAGTTGAGGAcctaattgaagaaaatttccCTATTGATCAAACTAATATACCTAAGAAGGAACCTCAAGTTATTGGAGAAAACGAGTCTTTGCATGTAGGTTTTGAGGAACCAGGTAGTCCAGAAGACTTGGCTGTAGATTGCCTGATCGGAGATGGTAATATAGAGAAAATGCCTTTATCTGGGTTTGATCCAATCAACCATGACCCTGGAAACTTGTGTTCCGAGTTTGATGGAGATCACTGCTTTGCTTCACGTGATTTACAGTGTGGAACATCATTTAACACCATGCAGTTATCTCCAATTTCTGATATCCCAATCTGGAGAACAGATGAGTGCATTAACGAATCTGATATATCATgcaatgatttaaaaaattctattccTTGTGGGGAAGCTTATTTGGCGGAACTGTCCAAGTCTCTCTTGAACTTCACTAATGAAGAAGAACTCTATTTGATGGATGTTGATGGGAAAGATGGGCTTGATAAGTCTTATTATGATGGCCTGAGTTCACTCTTGTTAAATTCACCAAATGATGTTAGTCCAGATCAGATACccaaaataattgaaacagAGACGTTACCTGCTTCACAAGAATATGTTACGGATCTGTCAGTTTCTTGTCATGTAGAAGCAGACAATAGCAAGAGGTCATGCTCTGGCATTGAACAAGTGGTTCATAAATCAGAGGCCTCAATTCCATCTTCTGTCTCAGCTAAAGATCCTCGGTATCCTGAACTGATTAATGGAGTTATTTGCTGTACATTAAACACTGAGGACACAGAAGTTCCATCCAATGATGATGTTTTCCTACCCTTTAATGTTCCCCCTTTGACAGTCCCCTCTCCTAAATGGAATTTTCAAGCAGACAATAAAccaatttcttcatttgttgaGGATTTTGGATATAGTCATAGAACTGATGAAAGAGGTACAATCTTGATGCCTGCAGAACAAAAAACCACTGGAGAGTCTGATGTATCTTCTCACATGATGGGATCACATGCCTTGTCGGGAACTTTTACTGGTTCTAAGTTAAAATACGAGTTTCCCAATAGTCACTCCTCACAGACAGCATGTAGGAGTGCGGTTGTTGTTTCTGGTGGCGCAGGTGGAATTAATTCTGCAAACACAAGCACCGATTCTTTTGTGCATGTGAACCCAAAGGAAGAGGCTACTAATATTGCCCTGACAAAGCATTTAAGCAGTCATTTAACGAACTCTTCTAATGAGAAATCAGCTCATTGTTCTAAGAGCTTTGGAAGTCATCCTCATGCTACTGCCTTCGGCATGAAACAGGAAAAAGATTTAGCCATGCCAATTCAAGATAATCAGCTTCGACATGCTGAAGTGGGATCCTCTGATGTTGTTAGCTCAGGGCTGGTTGCAGACCCTCTAACATCAGATCAAGAAGAGCAACATGTGGAGAGTGAGGATGATGTTCCGTATTATTCTGACATTGAGGCCATGATACTTGATATGGACTTGGATCCTGACGACCAGGATTTGTCTTGTAGTGAGGAAGtatcaaaatatcaacatGAGGACACTAAGCGAGCTATCATAAGGCTGGAACAGGGTGCTCGTTCTTATATGCAAAGAGCCATTGCTTCACATGGAGCATTTGCTGTTTTATATGATCGCCATTCAAAGCATTATATAAAGAAACCTGAGGTTTTACTTGGCAGAGCAACAGAAGATGTTCTTGTTGACATTGACTTGGGCAAAGGGGGGTATACCAACAAAATATCTCGACGTCAGGCAATTATAAAGATGGACAAAATTGGATCGTTCTACCTCACAAACCTTGGCAAGAGTTCGATCATGGTAAATAACAAAGAAGTGCACCCCGGTCAATCGCAAAGACTACATTCAAGTTGTCTTGTTGAGGTAAAGGGTATGCCATTCATATTTGAGACAAATCAAAGTCGTGTGAAGCAATACCTGGATAGTATTACTGAAAATAACTTTACCCTATA 2558 0.3894 MGALATFAPWTPEDDLLLKNAVEAGASLESLAKGAVQFSRRFSVREIQDRWYSLLYDPIISAEASACMSNFELSISSHPSKFSKIGQSKEIKLNSVKRKAESVRSSYYAMRKRICNNIITSMDLSFLAPPANSNYLENGAEPLPENCMPEGAPLDNFGFKGSNFDPMHCALPENMMDPSEATNGVTSHAFYTGVEDLIEENFPIDQTNIPKKEPQVIGENESLHVGFEEPGSPEDLAVDCLIGDGNIEKMPLSGFDPINHDPGNLCSEFDGDHCFASRDLQCGTSFNTMQLSPISDIPIWRTDECINESDISCNDLKNSIPCGEAYLAELSKSLLNFTNEEELYLMDVDGKDGLDKSYYDGLSSLLLNSPNDVSPDQIPKIIETETLPASQEYVTDLSVSCHVEADNSKRSCSGIEQVVHKSEASIPSSVSAKDPRYPELINGVICCTLNTEDTEVPSNDDVFLPFNVPPLTVPSPKWNFQADNKPISSFVEDFGYSHRTDERGTILMPAEQKTTGESDVSSHMMGSHALSGTFTGSKLKYEFPNSHSSQTACRSAVVVSGGAGGINSANTSTDSFVHVNPKEEATNIALTKHLSSHLTNSSNEKSAHCSKSFGSHPHATAFGMKQEKDLAMPIQDNQLRHAEVGSSDVVSSGLVADPLTSDQEEQHVESEDDVPYYSDIEAMILDMDLDPDDQDLSCSEEVSKYQHEDTKRAIIRLEQGARSYMQRAIASHGAFAVLYDRHSKHYIKKPEVLLGRATEDVLVDIDLGKGGYTNKISRRQAIIKMDKIGSFYLTNLGKSSIMVNNKEVHPGQSQRLHSSCLVEVKGMPFIFETNQSRVKQYLDSITENNFTL 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00875 852 Pfam FHA domain 753 823 IPR000253 GO:0005515
Bva10g00875 852 Gene3D - 693 844 - -
Bva10g00875 852 SUPERFAMILY SMAD/FHA domain 733 833 IPR008984 GO:0005515
Bva10g00875 852 MobiDBLite consensus disorder prediction 596 610 - -
Bva10g00875 852 PANTHER MICROSPHERULE PROTEIN 1 1 848 IPR037912 GO:0002151|GO:0031011|GO:0071339
Bva10g00875 852 ProSiteProfiles Forkhead-associated (FHA) domain profile. 752 808 IPR000253 GO:0005515
Bva10g00875 852 SMART FHA_2 751 808 IPR000253 GO:0005515
Bva10g00875 852 Pfam N-terminal region of micro-spherule protein 10 75 IPR025999 -
Bva10g00875 852 CDD FHA 748 833 IPR000253 GO:0005515
Bva10g00875 852 PANTHER FHA DOMAIN PROTEIN 1 848 - -
Bva10g00875 852 MobiDBLite consensus disorder prediction 596 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00875 Bva-Chr10 6692096 6698353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00875 - - aprc:113865691 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00875 10 6692096 6698353 Bva10g00875 10 6692096 6698353 ECH