Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00869 ATGGAGGAAGAGCATGATTTTAGTGGAAGTAGTGGCACTAACTTGGAGACTTGCAAGTCTGAGAGATCGGTGTGGCTGATGAAGTGTCCCTTGGTCGTCGCCAAGTCATGGCAAAGTCATCCACCCTCTCATCCCCAACCTCTCGCCAAGGTCGTCCTCTCCCTTGATCCTCTCCAAGCCGACGATCCCTCAGCCCTTCAGTTCACAATGGAGATGGCTGGAACAGATGCCGCAAATTTgccaaaaatttattctctgAATATGTCCAAAGACTTTGTTCCTATGTGTGTCTTCTCTGAGGCAAATCAAGGCAAAGTCGCAATGGAGGGGAAAGTAGAAcataaatttgatatgaagCCCCATGGTGAAAACATTGAAGAGTATGGAAGATTGTGCCGTGAGCGGACAAACAAATCTATGATTAAAAATCGGCAAATTCAGGTCATTGATAATGATCGTGGAGTTCTAATGAGGCCTATGCCTGGAATGGTTGGTCTAGTTTCATCCAGCTCAAAGGATAAGAAGAAGACACCGCCAGTTAAACAATCTGATACAAAGAGAACAAGGAGAGATCGCGGGGAGCTGGAGGATATAATGTTTAAGTTATTTGAAAGGCAGCCTAATTGGGCTTTAAAGCAGCTAGTCCAAGAAACTGACCAGCCTGCAcAATTCTTGAAGGAGATACTGAATGAACTTTGTGTATACAATAAAAGAGGTGCTAATCAAGGAACCTACGAGCTCAAGCCCGAATACAAGAAATCAGTCGAAGATGCAACTGCCGAATA 785 0.4293 MEEEHDFSGSSGTNLETCKSERSVWLMKCPLVVAKSWQSHPPSHPQPLAKVVLSLDPLQADDPSALQFTMEMAGTDAANLPKIYSLNMSKDFVPMCVFSEANQGKVAMEGKVEHKFDMKPHGENIEEYGRLCRERTNKSMIKNRQIQVIDNDRGVLMRPMPGMVGLVSSSSKDKKKTPPVKQSDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKKSVEDATAE 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00869 261 Gene3D - 187 254 IPR036388 -
Bva10g00869 261 PANTHER TRANSCRIPTION INITIATION FACTOR IIF, BETA SUBUNIT 9 259 - -
Bva10g00869 261 MobiDBLite consensus disorder prediction 174 191 - -
Bva10g00869 261 Pfam TFIIF, beta subunit N-terminus 21 139 IPR040504 -
Bva10g00869 261 PANTHER GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 9 259 IPR003196 GO:0005674|GO:0006366|GO:0006367
Bva10g00869 261 SUPERFAMILY Rap30/74 interaction domains 13 121 IPR011039 GO:0006367
Bva10g00869 261 SUPERFAMILY "Winged helix" DNA-binding domain 187 253 IPR036390 -
Bva10g00869 261 Pfam TFIIF, beta subunit HTH domain 189 252 IPR040450 -
Bva10g00869 261 CDD TFIIF_beta 14 120 - -
Bva10g00869 261 MobiDBLite consensus disorder prediction 165 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00869 Bva-Chr10 6659175 6662165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00869 K03139 - gmx:100788473 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00869 10 6659175 6662165 Bva10g00869 10 6659175 6662165 ECH