Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00863 ATGAGTTTGGAGGATTCTGGAAAGAAACCACTATCAGTTGGGCCATGGGGAGGCAATGGAGGAGCCCGTTGGGATGATGGGATATATTCAACTGTTAAGCAATTGGTGATAGCTCATGGGGCCGGTATTCACTCCCTCCAGATTGAATACGATAAGAAGGGTTCCTCCATCTGGTCCAACAGGCATGGTGGCACTGGAGGCCataaaaatgataagGTCAAGCTTGACTACCCAGATGAGTTCCTAACTTCAATTCATGGATATTATGGTAGCTTAAATGATGGGGGGACGGCCTTTATTCGATCACTGAGTTTtgaaagcaataaaaaaaCTCATGGACCATTTGGTATTGAACAGGGGACATATTTTTCATTCCCTACGACGGGGGGCAAGATTGTTGGATTCTATGGCAGGTGTGGTTGGCACTTAGATGCCATTGGAGTCTATCTGAAGCCTTTACAGCAACCAAAACCGGAAAAAGCTTTGGTTCATTCACAAAGCTACCTTACTAATTCTACTGGGAATGTTAGTTATTCTGTGATACAAGGAAGTGTAGGCCAAAGCTATGATATTGTTCTTGCTGTAAGACAGAAAGACGATTTGAGTAAACCTATTATGAACAACGCCTCCAAGAATCTTTCTGTGGCAAAAGACTTTAACCACATCGAACAGAAGGAACAGGTGCAGAAGGCGCCTTCAAACTTAACGGTTGAAGGTGAGGTAACATATGGACCTTGGGGTGGTCATGGTGGATCCATATTCGACGATGGAGTCTACACAGGAATTAGACAAATCAACCTGTCACGAAATGTTGGAATTGTATGGATTAGAGTTTTGTATGATGACGATGGGGTGGCCGTATGGGGAAGCAAACAAGGAGGGACCGGGGGATTTAAAAACGAAAAGATAATTTTTGATTTCCCTTCTGAAGTGCTGACACATATAACTGGCTACTATGGACCTCTGATGTACATGGGACCTGCTGTTATAAAGTCACTGACTTTCTACACCACCAAAAGGATATATGGACCATATGGAGATGAACAAGGGAATCATTTTACTACCAGGGTAAAAGAAGGGAAAGTGGTTGGCATCCATGGCAGAAAAGGCTTGTTTCTAGATGCCCTTGGTGTACATGTTGTAGAAGGCAAAATTGAAACATCATTGACATTGACCTCACCTTCTAAATCCAACAGGAAGCCAAGCATTGCTGAAATAGATAATCCTCAGTGGCCTGCCGAACTGGTATTTCCAAAACCGGCTATACCAATTGAAGAGgTTGCTTGCGGTGTGATTAAAGAACCAGCTCCATGCGGACCAGGCCCATGGGGTGGGGATGGAGGTAGACCTTGGGATGATGGAGTCTTTTCAGGTATTAAGCAGATTTATTTTACAAGAGTATCAGAAGCCATTTGCTCAATTCAAATTGAGTATGATCGAAATGGGCAATCTGTATGGTCTGTCAAGCATGGTGGCAATGGAGGAGACACCATTCACCGGCTAAAGTTGGAGTATCCACATGAGGTACTAAACTGCATATCTGGCTATTATGGATCAATCAGTCAAGATGATCGGCTTGTAGTCATAAAGTCACTGACCTTTTATACAAGTCGAGGAAAGTATGGTCCATATGGTGAGGAAATAGGAAAATTTTTCACTTCAACTACAACGGAGGGAAAAATCGTGGGTTTCCATGGCAGGAGTAGCTTCTACTTGGATGCCATTGGGGTCCATATGCAACACTGGCTAGGAAATCAGAAAACTTCGAAATCCTCTGTGAGACACTTCCAGAACAAACTTGCTCGGACCTCAAACTTCAAGTG 1823 0.4306 MSLEDSGKKPLSVGPWGGNGGARWDDGIYSTVKQLVIAHGAGIHSLQIEYDKKGSSIWSNRHGGTGGHKNDKVKLDYPDEFLTSIHGYYGSLNDGGTAFIRSLSFESNKKTHGPFGIEQGTYFSFPTTGGKIVGFYGRCGWHLDAIGVYLKPLQQPKPEKALVHSQSYLTNSTGNVSYSVIQGSVGQSYDIVLAVRQKDDLSKPIMNNASKNLSVAKDFNHIEQKEQVQKAPSNLTVEGEVTYGPWGGHGGSIFDDGVYTGIRQINLSRNVGIVWIRVLYDDDGVAVWGSKQGGTGGFKNEKIIFDFPSEVLTHITGYYGPLMYMGPAVIKSLTFYTTKRIYGPYGDEQGNHFTTRVKEGKVVGIHGRKGLFLDALGVHVVEGKIETSLTLTSPSKSNRKPSIAEIDNPQWPAELVFPKPAIPIEEVACGVIKEPAPCGPGPWGGDGGRPWDDGVFSGIKQIYFTRVSEAICSIQIEYDRNGQSVWSVKHGGNGGDTIHRLKLEYPHEVLNCISGYYGSISQDDRLVVIKSLTFYTSRGKYGPYGEEIGKFFTSTTTEGKIVGFHGRSSFYLDAIGVHMQHWLGNQKTSKSSVRHFQNKLARTSNFK 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00863 607 Pfam Jacalin-like lectin domain 251 381 IPR001229 -
Bva10g00863 607 Pfam Jacalin-like lectin domain 21 152 IPR001229 -
Bva10g00863 607 Pfam Jacalin-like lectin domain 448 580 IPR001229 -
Bva10g00863 607 CDD Jacalin 451 580 IPR033734 GO:0030246
Bva10g00863 607 SMART Jacalin_2 448 581 IPR001229 -
Bva10g00863 607 SMART Jacalin_2 251 382 IPR001229 -
Bva10g00863 607 SMART Jacalin_2 21 152 IPR001229 -
Bva10g00863 607 Gene3D - 2 150 IPR036404 -
Bva10g00863 607 Gene3D - 433 580 IPR036404 -
Bva10g00863 607 Gene3D - 229 381 IPR036404 -
Bva10g00863 607 PANTHER BNAA06G13880D PROTEIN 527 595 - -
Bva10g00863 607 PANTHER JACALIN-RELATED LECTIN 3 527 595 - -
Bva10g00863 607 ProSiteProfiles Jacalin-type lectin domain profile. 10 152 IPR001229 -
Bva10g00863 607 PANTHER JACALIN-RELATED LECTIN 3 8 36 - -
Bva10g00863 607 PANTHER JACALIN-RELATED LECTIN 3 31 526 - -
Bva10g00863 607 ProSiteProfiles Jacalin-type lectin domain profile. 240 382 IPR001229 -
Bva10g00863 607 PANTHER BNAA06G13880D PROTEIN 8 36 - -
Bva10g00863 607 PANTHER BNAA06G13880D PROTEIN 31 526 - -
Bva10g00863 607 ProSiteProfiles Jacalin-type lectin domain profile. 437 581 IPR001229 -
Bva10g00863 607 CDD Jacalin 251 380 IPR033734 GO:0030246
Bva10g00863 607 SUPERFAMILY Mannose-binding lectins 11 152 IPR036404 -
Bva10g00863 607 CDD Jacalin 21 151 IPR033734 GO:0030246
Bva10g00863 607 SUPERFAMILY Mannose-binding lectins 437 579 IPR036404 -
Bva10g00863 607 SUPERFAMILY Mannose-binding lectins 242 380 IPR036404 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00863 Bva-Chr10 6620145 6623301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00863 247 579 EF-hand Containing Proteins AT1G33790 24.340 6.29e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00863 - - gmx:100804991 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00863 10 6620145 6623301 Bva10g00863 10 6620145 6623301 ECH