Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00862 ATGGCTACCAAAGTTCTTCTGTTGGCATTGGCAATATGCCGGTTGATCGTGACCGTAGGATTGGAAATGGTGGCAGTACCGACTGAGGTGCTGCGTCTTGGAATTGAGGGTGAGCTGAGCTTGGATCGACGGGACGTGGAAAGGGCTTCGAATGATTTCGGCAAGTTGAGGAGAGCGGAGCCGTTAGCGGTGGTGCACCCGGCATCGGCAGAGGACATAGTACGAGTGATTCAAACAGCTTACGAGTGGGGTTATGGCTTGACGGTGTCGGCGAGGGGACACGGGCACTCCATAAATGGACAGGCGCAGTCAAGCAAAGGCGTGGTGATAGAAATGAGCAGCGAGAGGAGAAGAACAAGTGCTGCTGCGACTACTAAAGTTAATGAGAAGGAGAGGTATGTGGAGGTGTGGGGTGGGGAGTTGTGGATACAAGTATTAAGGGCAACCCTGGAGTATGGGCTAGCACCCATGTCTTGGACCGATTACTTGTATTTGTCAGTGGGTGGAACCCTATCCAATGCTGGCATAAGTGGCCAGACCTTCAATCACGGTCCTCAGATTAGCAACGTTCTCGAGCTCGACGTTGTAACAGGTAAAGGTGAGCTGTTGACATGTTCAAATGAGCGTAACTCCAAGTTGTTCCATGCTGTTCTCGGTGGTTTAGGACAATTTGGAATTATCACACGGGCCAGAATTGCTCTTGAGCCAGCTCCTCACAGGGTTCGGTGGATACGAGTACTATACTCAAATTTTGCAGTGTTCACAAAGGACCAAGAGTTTCTGATCTCTCTGCATGGGAAACCAGCAAGGCAGAGATTCGACTACGTTGAGGGTTTTGTTATAGTAGACGAAGGGCTCATTAACAATTGGAGGTCCTCATTCTTTTCACCAAGCAACCCTGTTAAAATCAGTTCCCTCAAAGCCGATGGGGGTGTTTTATACTGCTTGGAGATTGCCAAGAATTACCGAGAAGGCGATGCAGATATTATTGATCAGGAGATCGAGAGTTTGTTGAACAAGTTAGATTTCATACCGTCGTCTGTGTTCACAACTGACCTGTCTTATGTGGATTTCCTCGACCGAGTTCACAAGGCTGAGCTCAAGCTCAGGGCCAAGTCTCTGTGGGATGTTCCTCATCCGTGGTTGAACCTCTTTGTCCCTAAATCAAGAATTGCTGACTTCGATAGGGGTGTGTTCAAGGGCATTCTGGGAAATAAGACGAGTGGGCCCATCCTCATCTACCCCATGAACAAGAACAAGTGGGACCAGAGGAGCTCGGTGGTGACACCGGACGAGGACGTGTTTTATCTGGTGGCATTTCTGAGATCAGCTTTGGATACGGAGTCGTTGGATTACCTGACTTATCAGAACCGTCAAATTCTGAGATTCTGTGACGATGCCGATATCGGGGTGAAACAGTACCTTCCCCACTACACAACGCAAGAAGAGTGGATGGACCACTTTGGAGATAAGTGGGACCAGTTTTATCAGAGGAAGATGCAATTCGATCCCCGGCGCATCTTAGCCACAGGCCAGCGTATCTTTATGCCTTTCACTTCCACTACCACCATCACCAATGATGTCATGTA 1589 0.4902 MATKVLLLALAICRLIVTVGLEMVAVPTEVLRLGIEGELSLDRRDVERASNDFGKLRRAEPLAVVHPASAEDIVRVIQTAYEWGYGLTVSARGHGHSINGQAQSSKGVVIEMSSERRRTSAAATTKVNEKERYVEVWGGELWIQVLRATLEYGLAPMSWTDYLYLSVGGTLSNAGISGQTFNHGPQISNVLELDVVTGKGELLTCSNERNSKLFHAVLGGLGQFGIITRARIALEPAPHRVRWIRVLYSNFAVFTKDQEFLISLHGKPARQRFDYVEGFVIVDEGLINNWRSSFFSPSNPVKISSLKADGGVLYCLEIAKNYREGDADIIDQEIESLLNKLDFIPSSVFTTDLSYVDFLDRVHKAELKLRAKSLWDVPHPWLNLFVPKSRIADFDRGVFKGILGNKTSGPILIYPMNKNKWDQRSSVVTPDEDVFYLVAFLRSALDTESLDYLTYQNRQILRFCDDADIGVKQYLPHYTTQEEWMDHFGDKWDQFYQRKMQFDPRRILATGQRIFMPFTSTTTITNDVM 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00862 529 PANTHER GULONOLACTONE OXIDASE 6 518 - -
Bva10g00862 529 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 61 96 IPR006093 GO:0016491
Bva10g00862 529 SUPERFAMILY FAD-linked oxidases, C-terminal domain 238 515 IPR016164 GO:0003824|GO:0050660
Bva10g00862 529 ProSiteProfiles PCMH-type FAD-binding domain profile. 57 237 IPR016166 GO:0071949
Bva10g00862 529 PANTHER CYTOKININ OXIDASE 5-RELATED 6 518 - -
Bva10g00862 529 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 238 515 IPR015345 GO:0009690|GO:0019139|GO:0050660
Bva10g00862 529 Pfam FAD binding domain 61 206 IPR006094 GO:0050660
Bva10g00862 529 SUPERFAMILY FAD-binding/transporter-associated domain-like 36 236 IPR036318 GO:0050660
Bva10g00862 529 Gene3D - 42 515 IPR016167 -
Bva10g00862 529 Gene3D - 112 239 IPR016169 -
Bva10g00862 529 Gene3D - 240 474 IPR016170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00862 Bva-Chr10 6610346 6615806 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00862 K00279 - mnt:21404740 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00862 10 6610346 6615806 Bva10g00862 10 6610346 6615806 ECH