Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00856 ATGGTAAAGCAGTCGAATGCGTGGATGGCAATGCCGAAGAAGAGATGGCCTCTGATGGTACTGGCactgttttctctttctacaGTGATGGTACTCTTCATGAGAGCCACCTCCGATTGCGGCAATACTGGCACTAAAAATTTTGTAGCAGACGATCAAAGAGACGGTCAGATGCACTCCATCCAACTCGTCGATGGGGCACCGAATCCTCTAGAATTCATGAAGTCTAAGCTAGTTCTCATGGTTTCACATGAGCTGTCTCTTTCGGGTGGACCTCTGTTGTTGATGGAGCTAGCATTTTTGTTGAGGGCTGTTGGTTCTGAAGTTGTTTGGATTACTAATCAGAAACCTGTGGAACCAGACGAGGTGATTTACagtttgaaaaataagatGTTGGATAGAGGAGTGCAGGTCTTACCTGCTAAAGGTGAAAAGGCCATAGATACTGCTCTTAGAGCTGATCTTGTAATACTAAATACTGCTGTAGCTGGGAAGTGGCTGGATGCTGTTCTCAAGGAAAAAGTTTCCCGTGTTCTTCCAAAGGTTTTATGGTGGATTCATGAAATGCGAGGGCATTATTTCAAAGTGGAATATGTTAAACACCTACCTTTTGTTGCAGGCGCCATGATAGATTCACATACAACTGCAGAATACTGGAAGAATAGGACTAAGGAGCGCTTAGGGATTAAAATGCCTGAAACTTATGTTGTGCATCTTGGAAATAGCAAGGAACTTATGGAAGTCGCTGACGATAGTGTAGCAAAAAGGATTCTTCGTGAGCATGTTCGAGAATCTCTTGGTGTGAGAAATGATGACCTACTTTTTGCAATCATAAATAGTGTTTCCCGTGGTAAAGGGCAGGATTTGTTTCTTCGTTCCTTTTATGAAAGTCTACAACTAATCCAGCAGAAGAAACTGCAGGTGCCAAAACTGCATGCTGTTGTTGTAGGAAGTGATATGAATGCTCAGACAAAGTTTGAAACAGAGTTGCGCAAATTTGTTGTTGAGAAAAAGATTCAGGACTGTGTTCACTTCGTTAACAAAACCCTGACAGTGGCTCCATACCTGGCTTCTATTGATGTTCTAGTGCAGAATTCTCAGGCCCGTGGAGAATGTTTTGGGAGGATAACAATTGAAGCAATGGCATTTCGCCTGCCTGTACTGGGCACTGCAGCTGGGGGTACAATGGAGATTGTAATAAATGGATCTACTGGTTTGCTGCATCCTGCTGGCAAAGAAGGTGTGACGCCTCTTGCAAATAACATTGTGAAACTGGCAACTCACGTTGAGAGGAGACTGACCATGGGAAAGAAAGGATATGAGAGGGTGAAGGAGAGGTTTCTGGAGCACCACATGGCACACAGAATTGCGCTGGTTCTGAAGGATGTGTTGCGGAAAGCAAAGAGCCAAGGATA 1415 0.4325 MVKQSNAWMAMPKKRWPLMVLALFSLSTVMVLFMRATSDCGNTGTKNFVADDQRDGQMHSIQLVDGAPNPLEFMKSKLVLMVSHELSLSGGPLLLMELAFLLRAVGSEVVWITNQKPVEPDEVIYSLKNKMLDRGVQVLPAKGEKAIDTALRADLVILNTAVAGKWLDAVLKEKVSRVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTKERLGIKMPETYVVHLGNSKELMEVADDSVAKRILREHVRESLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLQLIQQKKLQVPKLHAVVVGSDMNAQTKFETELRKFVVEKKIQDCVHFVNKTLTVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTMEIVINGSTGLLHPAGKEGVTPLANNIVKLATHVERRLTMGKKGYERVKERFLEHHMAHRIALVLKDVLRKAKSQG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00856 471 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 470 - -
Bva10g00856 471 PANTHER GLYCOSYLTRANSFERASE 1 470 - -
Bva10g00856 471 CDD GT4_PimA-like 103 461 - -
Bva10g00856 471 Pfam Glycosyl transferases group 1 262 442 IPR001296 GO:0016757
Bva10g00856 471 Gene3D Glycogen Phosphorylase B; 250 447 - -
Bva10g00856 471 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 74 465 - -
Bva10g00856 471 Pfam Glycosyl-transferase family 4 75 254 IPR041693 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00856 Bva-Chr10 6582091 6586104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00856 1 468 Glycosyltransferase AT1G19710 74.947 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00856 - - aprc:113847885 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00856 10 6582091 6586104 Bva10g00856 10 6582091 6586104 ECH