Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00845 ATGTCTATGTCTAAGAAAACTGTGGTGTCAGTAGAGCTGCTTTGTTCAAGGTGCAGGCAAAAGGTTATGAAGTTAATAGCAAGAGTTGAAGGAATAACTTCCATTGTCCTTGATCCGGCCAAGAACACAGTGACTGTGATTGGTGAAGCTGATCCAGTGAGGATCATCAACAAGGtcagaaaattcagaaaatcaGCAAGAATTGTGAGTTTTGGTCCTcccaaggaagaaaagaaggaggagAAAAAAGATGATATTCCAAAATTATGTCAGAGATGCGATGTATGGTCTCATTGGTATGTCATTGCTGAACATAATTATAGCTATTGCTCTATCATGTA 341 0.3402 MSMSKKTVVSVELLCSRCRQKVMKLIARVEGITSIVLDPAKNTVTVIGEADPVRIINKVRKFRKSARIVSFGPPKEEKKEEKKDDIPKLCQRCDVWSHWYVIAEHNYSYCSIM 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00845 113 CDD HMA 15 67 IPR006121 GO:0046872
Bva10g00845 113 Pfam Heavy-metal-associated domain 9 62 IPR006121 GO:0046872
Bva10g00845 113 Gene3D - 1 77 - -
Bva10g00845 113 SUPERFAMILY HMA, heavy metal-associated domain 3 69 IPR036163 GO:0046872
Bva10g00845 113 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 5 113 - -
Bva10g00845 113 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3-LIKE 5 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00845 Bva-Chr10 6519039 6521072 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00845 - K10572 qlo:115958868 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00845 10 6519039 6521072 Bva10g00845 10 6519039 6521072 ECH